Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CHMP1BQ7LBR1 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP1BQ7LBR1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP1BQ7LBR1 CYP21A1P-202ENST00000354927 1481 ntBASIC18.39■□□□□ 0.54
CHMP1BQ7LBR1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
CHMP1BQ7LBR1 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.39■□□□□ 0.54
CHMP1BQ7LBR1 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP1BQ7LBR1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP1BQ7LBR1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CHMP1BQ7LBR1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP1BQ7LBR1 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP1BQ7LBR1 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP1BQ7LBR1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CHMP1BQ7LBR1 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CHMP1BQ7LBR1 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.39■□□□□ 0.53
CHMP1BQ7LBR1 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.39■□□□□ 0.53
CHMP1BQ7LBR1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CHMP1BQ7LBR1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.39■□□□□ 0.53
CHMP1BQ7LBR1 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.39■□□□□ 0.53
CHMP1BQ7LBR1 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP1BQ7LBR1 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP1BQ7LBR1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP1BQ7LBR1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CHMP1BQ7LBR1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.39■□□□□ 0.53
CHMP1BQ7LBR1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP1BQ7LBR1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
CHMP1BQ7LBR1 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP1BQ7LBR1 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.39■□□□□ 0.53
CHMP1BQ7LBR1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP1BQ7LBR1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP1BQ7LBR1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP1BQ7LBR1 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
CHMP1BQ7LBR1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP1BQ7LBR1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CHMP1BQ7LBR1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP1BQ7LBR1 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP1BQ7LBR1 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.38■□□□□ 0.53
CHMP1BQ7LBR1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP1BQ7LBR1 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
CHMP1BQ7LBR1 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP1BQ7LBR1 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP1BQ7LBR1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.38■□□□□ 0.53
CHMP1BQ7LBR1 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP1BQ7LBR1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.38■□□□□ 0.53
CHMP1BQ7LBR1 AC091874.3-201ENST00000512672 1195 ntBASIC18.38■□□□□ 0.53
CHMP1BQ7LBR1 AC098934.4-201ENST00000564127 592 ntBASIC18.38■□□□□ 0.53
CHMP1BQ7LBR1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP1BQ7LBR1 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP1BQ7LBR1 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP1BQ7LBR1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP1BQ7LBR1 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP1BQ7LBR1 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP1BQ7LBR1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP1BQ7LBR1 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.38■□□□□ 0.53
CHMP1BQ7LBR1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP1BQ7LBR1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CHMP1BQ7LBR1 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP1BQ7LBR1 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP1BQ7LBR1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP1BQ7LBR1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.37■□□□□ 0.53
CHMP1BQ7LBR1 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CHMP1BQ7LBR1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP1BQ7LBR1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP1BQ7LBR1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP1BQ7LBR1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP1BQ7LBR1 LINC01521-201ENST00000504184 1943 ntBASIC18.37■□□□□ 0.53
CHMP1BQ7LBR1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP1BQ7LBR1 AC011484.1-201ENST00000377652 1995 ntBASIC18.37■□□□□ 0.53
CHMP1BQ7LBR1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP1BQ7LBR1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CHMP1BQ7LBR1 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP1BQ7LBR1 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP1BQ7LBR1 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP1BQ7LBR1 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.37■□□□□ 0.53
CHMP1BQ7LBR1 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.37■□□□□ 0.53
CHMP1BQ7LBR1 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CHMP1BQ7LBR1 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.37■□□□□ 0.53
CHMP1BQ7LBR1 RNA5SP413-201ENST00000516373 109 ntBASIC18.37■□□□□ 0.53
CHMP1BQ7LBR1 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.37■□□□□ 0.53
CHMP1BQ7LBR1 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.37■□□□□ 0.53
CHMP1BQ7LBR1 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.37■□□□□ 0.53
CHMP1BQ7LBR1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP1BQ7LBR1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.37■□□□□ 0.53
CHMP1BQ7LBR1 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP1BQ7LBR1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.37■□□□□ 0.53
CHMP1BQ7LBR1 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.37■□□□□ 0.53
CHMP1BQ7LBR1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CHMP1BQ7LBR1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.37■□□□□ 0.53
CHMP1BQ7LBR1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP1BQ7LBR1 KRT17P1-201ENST00000399211 1546 ntBASIC18.37■□□□□ 0.53
CHMP1BQ7LBR1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP1BQ7LBR1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP1BQ7LBR1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP1BQ7LBR1 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP1BQ7LBR1 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CHMP1BQ7LBR1 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP1BQ7LBR1 AC090340.1-201ENST00000620778 4980 ntBASIC18.36■□□□□ 0.53
CHMP1BQ7LBR1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP1BQ7LBR1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP1BQ7LBR1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms