Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC23.82■■□□□ 1.4
USP50Q70EL3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
USP50Q70EL3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC23.81■■□□□ 1.4
USP50Q70EL3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
USP50Q70EL3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
USP50Q70EL3 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.81■■□□□ 1.4
USP50Q70EL3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
USP50Q70EL3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP50Q70EL3 IPPK-202ENST00000375522 882 ntTSL 3 BASIC23.81■■□□□ 1.4
USP50Q70EL3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC23.81■■□□□ 1.4
USP50Q70EL3 AC004980.1-204ENST00000429707 299 ntBASIC23.81■■□□□ 1.4
USP50Q70EL3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC23.81■■□□□ 1.4
USP50Q70EL3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP50Q70EL3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP50Q70EL3 GOLGA2P6-201ENST00000340929 2049 ntBASIC23.81■■□□□ 1.4
USP50Q70EL3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
USP50Q70EL3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
USP50Q70EL3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
USP50Q70EL3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
USP50Q70EL3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.8■■□□□ 1.4
USP50Q70EL3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC23.8■■□□□ 1.4
USP50Q70EL3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC23.8■■□□□ 1.4
USP50Q70EL3 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
USP50Q70EL3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
USP50Q70EL3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
USP50Q70EL3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
USP50Q70EL3 PCED1CP-201ENST00000419887 785 ntBASIC23.8■■□□□ 1.4
USP50Q70EL3 AL450487.1-201ENST00000426799 995 ntBASIC23.8■■□□□ 1.4
USP50Q70EL3 AC092647.4-201ENST00000457211 535 ntBASIC23.8■■□□□ 1.4
USP50Q70EL3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC23.8■■□□□ 1.4
USP50Q70EL3 AL121956.5-201ENST00000625261 221 ntBASIC23.8■■□□□ 1.4
USP50Q70EL3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC23.8■■□□□ 1.4
USP50Q70EL3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
USP50Q70EL3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
USP50Q70EL3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC23.8■■□□□ 1.4
USP50Q70EL3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
USP50Q70EL3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
USP50Q70EL3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
USP50Q70EL3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
USP50Q70EL3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
USP50Q70EL3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC23.79■■□□□ 1.4
USP50Q70EL3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
USP50Q70EL3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC23.79■■□□□ 1.4
USP50Q70EL3 FAM86EP-206ENST00000510506 987 ntBASIC23.79■■□□□ 1.4
USP50Q70EL3 AC131212.4-201ENST00000623606 975 ntBASIC23.79■■□□□ 1.4
USP50Q70EL3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
USP50Q70EL3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC23.79■■□□□ 1.4
USP50Q70EL3 PTBP1P-201ENST00000554374 1601 ntBASIC23.79■■□□□ 1.4
USP50Q70EL3 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
USP50Q70EL3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
USP50Q70EL3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
USP50Q70EL3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
USP50Q70EL3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP50Q70EL3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP50Q70EL3 KRT8P20-201ENST00000423953 1409 ntBASIC23.78■■□□□ 1.4
USP50Q70EL3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC23.78■■□□□ 1.4
USP50Q70EL3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC23.78■■□□□ 1.4
USP50Q70EL3 COX11P1-201ENST00000489116 835 ntBASIC23.78■■□□□ 1.4
USP50Q70EL3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
USP50Q70EL3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
USP50Q70EL3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC23.78■■□□□ 1.4
USP50Q70EL3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC23.78■■□□□ 1.4
USP50Q70EL3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC23.78■■□□□ 1.4
USP50Q70EL3 AC116562.4-202ENST00000641738 218 ntBASIC23.78■■□□□ 1.4
USP50Q70EL3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP50Q70EL3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP50Q70EL3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP50Q70EL3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.78■■□□□ 1.4
USP50Q70EL3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC23.78■■□□□ 1.4
USP50Q70EL3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP50Q70EL3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC23.77■■□□□ 1.4
USP50Q70EL3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
USP50Q70EL3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP50Q70EL3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
USP50Q70EL3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP50Q70EL3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP50Q70EL3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP50Q70EL3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
USP50Q70EL3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
USP50Q70EL3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC23.77■■□□□ 1.4
USP50Q70EL3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC23.77■■□□□ 1.4
USP50Q70EL3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC23.77■■□□□ 1.4
USP50Q70EL3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC23.77■■□□□ 1.4
USP50Q70EL3 SLC25A1P4-201ENST00000567977 778 ntBASIC23.77■■□□□ 1.4
USP50Q70EL3 AP000692.2-201ENST00000608391 879 ntBASIC23.77■■□□□ 1.4
USP50Q70EL3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
USP50Q70EL3 AP006587.1-201ENST00000534129 1502 ntBASIC23.77■■□□□ 1.4
USP50Q70EL3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
USP50Q70EL3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
USP50Q70EL3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
USP50Q70EL3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
USP50Q70EL3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.77■■□□□ 1.4
USP50Q70EL3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP50Q70EL3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
USP50Q70EL3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC23.76■■□□□ 1.39
USP50Q70EL3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP50Q70EL3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.76■■□□□ 1.39
USP50Q70EL3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP50Q70EL3 HIST1H2APS4-201ENST00000362070 348 ntBASIC23.76■■□□□ 1.39
USP50Q70EL3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms