Protein–RNA interactions for Protein: Q6PJG6

BRAT1, BRCA1-associated ATM activator 1, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1Q6PJG6 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BRAT1Q6PJG6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
BRAT1Q6PJG6 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BRAT1Q6PJG6 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
BRAT1Q6PJG6 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BRAT1Q6PJG6 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
BRAT1Q6PJG6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
BRAT1Q6PJG6 FEM1AP1-201ENST00000431297 1995 ntBASIC20.06■□□□□ 0.8
BRAT1Q6PJG6 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BRAT1Q6PJG6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
BRAT1Q6PJG6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
BRAT1Q6PJG6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.06■□□□□ 0.8
BRAT1Q6PJG6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
BRAT1Q6PJG6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
BRAT1Q6PJG6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
BRAT1Q6PJG6 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BRAT1Q6PJG6 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
BRAT1Q6PJG6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BRAT1Q6PJG6 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BRAT1Q6PJG6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BRAT1Q6PJG6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
BRAT1Q6PJG6 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
BRAT1Q6PJG6 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BRAT1Q6PJG6 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BRAT1Q6PJG6 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
BRAT1Q6PJG6 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
BRAT1Q6PJG6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BRAT1Q6PJG6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.05■□□□□ 0.8
BRAT1Q6PJG6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BRAT1Q6PJG6 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BRAT1Q6PJG6 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BRAT1Q6PJG6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.05■□□□□ 0.8
BRAT1Q6PJG6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BRAT1Q6PJG6 AC098590.1-201ENST00000468126 897 ntBASIC20.05■□□□□ 0.8
BRAT1Q6PJG6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BRAT1Q6PJG6 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.05■□□□□ 0.8
BRAT1Q6PJG6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.05■□□□□ 0.8
BRAT1Q6PJG6 MTDHP1-201ENST00000605323 784 ntBASIC20.05■□□□□ 0.8
BRAT1Q6PJG6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BRAT1Q6PJG6 AL121829.2-201ENST00000620908 328 ntBASIC20.05■□□□□ 0.8
BRAT1Q6PJG6 AL121906.2-201ENST00000621597 723 ntBASIC20.05■□□□□ 0.8
BRAT1Q6PJG6 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.05■□□□□ 0.8
BRAT1Q6PJG6 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
BRAT1Q6PJG6 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BRAT1Q6PJG6 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BRAT1Q6PJG6 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.05■□□□□ 0.8
BRAT1Q6PJG6 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BRAT1Q6PJG6 GABARAPL3-202ENST00000624044 1851 ntBASIC20.05■□□□□ 0.8
BRAT1Q6PJG6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
BRAT1Q6PJG6 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.05■□□□□ 0.8
BRAT1Q6PJG6 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BRAT1Q6PJG6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BRAT1Q6PJG6 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BRAT1Q6PJG6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
BRAT1Q6PJG6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.04■□□□□ 0.8
BRAT1Q6PJG6 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BRAT1Q6PJG6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BRAT1Q6PJG6 GCSHP5-201ENST00000443090 522 ntBASIC20.04■□□□□ 0.8
BRAT1Q6PJG6 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
BRAT1Q6PJG6 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.04■□□□□ 0.8
BRAT1Q6PJG6 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.04■□□□□ 0.8
BRAT1Q6PJG6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
BRAT1Q6PJG6 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
BRAT1Q6PJG6 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.04■□□□□ 0.8
BRAT1Q6PJG6 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BRAT1Q6PJG6 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BRAT1Q6PJG6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BRAT1Q6PJG6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BRAT1Q6PJG6 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.04■□□□□ 0.8
BRAT1Q6PJG6 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BRAT1Q6PJG6 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.03■□□□□ 0.8
BRAT1Q6PJG6 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRAT1Q6PJG6 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRAT1Q6PJG6 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRAT1Q6PJG6 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRAT1Q6PJG6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRAT1Q6PJG6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRAT1Q6PJG6 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRAT1Q6PJG6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
BRAT1Q6PJG6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
BRAT1Q6PJG6 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.03■□□□□ 0.8
BRAT1Q6PJG6 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BRAT1Q6PJG6 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
BRAT1Q6PJG6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
BRAT1Q6PJG6 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
BRAT1Q6PJG6 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.03■□□□□ 0.8
BRAT1Q6PJG6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.03■□□□□ 0.8
BRAT1Q6PJG6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.03■□□□□ 0.8
BRAT1Q6PJG6 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
BRAT1Q6PJG6 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.03■□□□□ 0.8
BRAT1Q6PJG6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.03■□□□□ 0.8
BRAT1Q6PJG6 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
BRAT1Q6PJG6 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BRAT1Q6PJG6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
BRAT1Q6PJG6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BRAT1Q6PJG6 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BRAT1Q6PJG6 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
BRAT1Q6PJG6 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.02■□□□□ 0.8
BRAT1Q6PJG6 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
BRAT1Q6PJG6 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms