Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C11orf88Q6PI97 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.38■□□□□ 0.37
C11orf88Q6PI97 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
C11orf88Q6PI97 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C11orf88Q6PI97 AL512408.1-201ENST00000569378 2000 ntBASIC17.38■□□□□ 0.37
C11orf88Q6PI97 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C11orf88Q6PI97 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C11orf88Q6PI97 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C11orf88Q6PI97 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
C11orf88Q6PI97 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
C11orf88Q6PI97 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
C11orf88Q6PI97 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C11orf88Q6PI97 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C11orf88Q6PI97 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.37■□□□□ 0.37
C11orf88Q6PI97 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.37■□□□□ 0.37
C11orf88Q6PI97 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
C11orf88Q6PI97 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C11orf88Q6PI97 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
C11orf88Q6PI97 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
C11orf88Q6PI97 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
C11orf88Q6PI97 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
C11orf88Q6PI97 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C11orf88Q6PI97 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.37■□□□□ 0.37
C11orf88Q6PI97 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
C11orf88Q6PI97 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.37■□□□□ 0.37
C11orf88Q6PI97 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
C11orf88Q6PI97 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
C11orf88Q6PI97 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C11orf88Q6PI97 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C11orf88Q6PI97 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.37■□□□□ 0.37
C11orf88Q6PI97 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
C11orf88Q6PI97 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C11orf88Q6PI97 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
C11orf88Q6PI97 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
C11orf88Q6PI97 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
C11orf88Q6PI97 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C11orf88Q6PI97 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C11orf88Q6PI97 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C11orf88Q6PI97 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C11orf88Q6PI97 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C11orf88Q6PI97 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
C11orf88Q6PI97 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
C11orf88Q6PI97 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
C11orf88Q6PI97 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf88Q6PI97 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf88Q6PI97 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.36■□□□□ 0.37
C11orf88Q6PI97 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.36■□□□□ 0.37
C11orf88Q6PI97 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf88Q6PI97 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf88Q6PI97 AC121338.2-201ENST00000622535 1744 ntBASIC17.36■□□□□ 0.37
C11orf88Q6PI97 AC003102.1-202ENST00000563394 1796 ntBASIC17.36■□□□□ 0.37
C11orf88Q6PI97 AP000974.1-201ENST00000623909 2387 ntBASIC17.36■□□□□ 0.37
C11orf88Q6PI97 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
C11orf88Q6PI97 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf88Q6PI97 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf88Q6PI97 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf88Q6PI97 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf88Q6PI97 KRT18P5-201ENST00000436075 1291 ntBASIC17.36■□□□□ 0.37
C11orf88Q6PI97 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.36■□□□□ 0.37
C11orf88Q6PI97 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.36■□□□□ 0.37
C11orf88Q6PI97 AC099778.1-201ENST00000568593 1911 ntBASIC17.36■□□□□ 0.37
C11orf88Q6PI97 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf88Q6PI97 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf88Q6PI97 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf88Q6PI97 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
C11orf88Q6PI97 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf88Q6PI97 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
C11orf88Q6PI97 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
C11orf88Q6PI97 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.36■□□□□ 0.37
C11orf88Q6PI97 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf88Q6PI97 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf88Q6PI97 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf88Q6PI97 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf88Q6PI97 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf88Q6PI97 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf88Q6PI97 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
C11orf88Q6PI97 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.35■□□□□ 0.37
C11orf88Q6PI97 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C11orf88Q6PI97 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
C11orf88Q6PI97 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C11orf88Q6PI97 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
C11orf88Q6PI97 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
C11orf88Q6PI97 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
C11orf88Q6PI97 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.35■□□□□ 0.37
C11orf88Q6PI97 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.35■□□□□ 0.37
C11orf88Q6PI97 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.35■□□□□ 0.37
C11orf88Q6PI97 AC105233.4-201ENST00000642045 216 ntBASIC17.35■□□□□ 0.37
C11orf88Q6PI97 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.35■□□□□ 0.37
C11orf88Q6PI97 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C11orf88Q6PI97 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.35■□□□□ 0.37
C11orf88Q6PI97 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.35■□□□□ 0.37
C11orf88Q6PI97 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
C11orf88Q6PI97 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C11orf88Q6PI97 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
C11orf88Q6PI97 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
C11orf88Q6PI97 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C11orf88Q6PI97 AP004607.7-201ENST00000527152 1677 ntBASIC17.35■□□□□ 0.37
C11orf88Q6PI97 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C11orf88Q6PI97 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C11orf88Q6PI97 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms