Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NIPAL3Q6P499 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
NIPAL3Q6P499 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NIPAL3Q6P499 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.21■□□□□ 0.51
NIPAL3Q6P499 RARRES2P4-201ENST00000514074 484 ntBASIC18.21■□□□□ 0.51
NIPAL3Q6P499 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.21■□□□□ 0.51
NIPAL3Q6P499 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NIPAL3Q6P499 RAP2CP1-201ENST00000605103 478 ntBASIC18.21■□□□□ 0.51
NIPAL3Q6P499 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NIPAL3Q6P499 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NIPAL3Q6P499 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
NIPAL3Q6P499 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NIPAL3Q6P499 AC125437.2-201ENST00000625180 2167 ntBASIC18.21■□□□□ 0.51
NIPAL3Q6P499 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NIPAL3Q6P499 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.21■□□□□ 0.51
NIPAL3Q6P499 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
NIPAL3Q6P499 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.2■□□□□ 0.5
NIPAL3Q6P499 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.2■□□□□ 0.5
NIPAL3Q6P499 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NIPAL3Q6P499 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NIPAL3Q6P499 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NIPAL3Q6P499 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NIPAL3Q6P499 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
NIPAL3Q6P499 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.2■□□□□ 0.5
NIPAL3Q6P499 AC006970.2-201ENST00000450065 779 ntBASIC18.2■□□□□ 0.5
NIPAL3Q6P499 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
NIPAL3Q6P499 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.2■□□□□ 0.5
NIPAL3Q6P499 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NIPAL3Q6P499 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.2■□□□□ 0.5
NIPAL3Q6P499 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NIPAL3Q6P499 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NIPAL3Q6P499 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.2■□□□□ 0.5
NIPAL3Q6P499 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NIPAL3Q6P499 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.2■□□□□ 0.5
NIPAL3Q6P499 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NIPAL3Q6P499 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
NIPAL3Q6P499 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NIPAL3Q6P499 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
NIPAL3Q6P499 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NIPAL3Q6P499 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NIPAL3Q6P499 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NIPAL3Q6P499 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NIPAL3Q6P499 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
NIPAL3Q6P499 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NIPAL3Q6P499 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
NIPAL3Q6P499 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
NIPAL3Q6P499 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.19■□□□□ 0.5
NIPAL3Q6P499 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NIPAL3Q6P499 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.19■□□□□ 0.5
NIPAL3Q6P499 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.19■□□□□ 0.5
NIPAL3Q6P499 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NIPAL3Q6P499 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
NIPAL3Q6P499 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.19■□□□□ 0.5
NIPAL3Q6P499 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NIPAL3Q6P499 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NIPAL3Q6P499 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NIPAL3Q6P499 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NIPAL3Q6P499 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NIPAL3Q6P499 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NIPAL3Q6P499 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NIPAL3Q6P499 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.18■□□□□ 0.5
NIPAL3Q6P499 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NIPAL3Q6P499 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NIPAL3Q6P499 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NIPAL3Q6P499 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NIPAL3Q6P499 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NIPAL3Q6P499 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.18■□□□□ 0.5
NIPAL3Q6P499 CROCCP5-201ENST00000436658 830 ntBASIC18.18■□□□□ 0.5
NIPAL3Q6P499 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NIPAL3Q6P499 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.18■□□□□ 0.5
NIPAL3Q6P499 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NIPAL3Q6P499 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NIPAL3Q6P499 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NIPAL3Q6P499 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.18■□□□□ 0.5
NIPAL3Q6P499 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NIPAL3Q6P499 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NIPAL3Q6P499 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NIPAL3Q6P499 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NIPAL3Q6P499 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NIPAL3Q6P499 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.18■□□□□ 0.5
NIPAL3Q6P499 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NIPAL3Q6P499 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NIPAL3Q6P499 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NIPAL3Q6P499 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NIPAL3Q6P499 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NIPAL3Q6P499 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.18■□□□□ 0.5
NIPAL3Q6P499 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NIPAL3Q6P499 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.17■□□□□ 0.5
NIPAL3Q6P499 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
NIPAL3Q6P499 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NIPAL3Q6P499 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
NIPAL3Q6P499 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NIPAL3Q6P499 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.17■□□□□ 0.5
NIPAL3Q6P499 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NIPAL3Q6P499 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NIPAL3Q6P499 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NIPAL3Q6P499 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NIPAL3Q6P499 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NIPAL3Q6P499 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NIPAL3Q6P499 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms