Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
PPP4R3AQ6IN85 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.75■■□□□ 1.23
PPP4R3AQ6IN85 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PPP4R3AQ6IN85 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PPP4R3AQ6IN85 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PPP4R3AQ6IN85 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
PPP4R3AQ6IN85 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PPP4R3AQ6IN85 HLA-G-202ENST00000376815 851 ntBASIC22.75■■□□□ 1.23
PPP4R3AQ6IN85 HLA-G-203ENST00000376818 1127 ntBASIC22.75■■□□□ 1.23
PPP4R3AQ6IN85 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC22.75■■□□□ 1.23
PPP4R3AQ6IN85 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
PPP4R3AQ6IN85 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC22.75■■□□□ 1.23
PPP4R3AQ6IN85 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC22.75■■□□□ 1.23
PPP4R3AQ6IN85 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC22.75■■□□□ 1.23
PPP4R3AQ6IN85 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
PPP4R3AQ6IN85 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC22.75■■□□□ 1.23
PPP4R3AQ6IN85 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC22.75■■□□□ 1.23
PPP4R3AQ6IN85 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PPP4R3AQ6IN85 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC22.75■■□□□ 1.23
PPP4R3AQ6IN85 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PPP4R3AQ6IN85 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PPP4R3AQ6IN85 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
PPP4R3AQ6IN85 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PPP4R3AQ6IN85 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC22.74■■□□□ 1.23
PPP4R3AQ6IN85 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC22.74■■□□□ 1.23
PPP4R3AQ6IN85 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC22.74■■□□□ 1.23
PPP4R3AQ6IN85 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PPP4R3AQ6IN85 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PPP4R3AQ6IN85 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
PPP4R3AQ6IN85 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PPP4R3AQ6IN85 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PPP4R3AQ6IN85 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC22.74■■□□□ 1.23
PPP4R3AQ6IN85 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC22.74■■□□□ 1.23
PPP4R3AQ6IN85 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC22.74■■□□□ 1.23
PPP4R3AQ6IN85 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
PPP4R3AQ6IN85 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
PPP4R3AQ6IN85 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PPP4R3AQ6IN85 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PPP4R3AQ6IN85 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC22.74■■□□□ 1.23
PPP4R3AQ6IN85 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PPP4R3AQ6IN85 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PPP4R3AQ6IN85 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PPP4R3AQ6IN85 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
PPP4R3AQ6IN85 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PPP4R3AQ6IN85 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC22.73■■□□□ 1.23
PPP4R3AQ6IN85 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC22.73■■□□□ 1.23
PPP4R3AQ6IN85 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PPP4R3AQ6IN85 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC22.73■■□□□ 1.23
PPP4R3AQ6IN85 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
PPP4R3AQ6IN85 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PPP4R3AQ6IN85 UNC93B5-201ENST00000530315 699 ntBASIC22.73■■□□□ 1.23
PPP4R3AQ6IN85 REXO2-208ENST00000539754 791 ntTSL 2 BASIC22.73■■□□□ 1.23
PPP4R3AQ6IN85 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC22.73■■□□□ 1.23
PPP4R3AQ6IN85 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC22.73■■□□□ 1.23
PPP4R3AQ6IN85 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
PPP4R3AQ6IN85 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC22.73■■□□□ 1.23
PPP4R3AQ6IN85 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PPP4R3AQ6IN85 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PPP4R3AQ6IN85 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PPP4R3AQ6IN85 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC22.73■■□□□ 1.23
PPP4R3AQ6IN85 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PPP4R3AQ6IN85 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PPP4R3AQ6IN85 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PPP4R3AQ6IN85 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PPP4R3AQ6IN85 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
PPP4R3AQ6IN85 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC22.72■■□□□ 1.23
PPP4R3AQ6IN85 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PPP4R3AQ6IN85 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PPP4R3AQ6IN85 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
PPP4R3AQ6IN85 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PPP4R3AQ6IN85 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC22.72■■□□□ 1.23
PPP4R3AQ6IN85 RNA5SP413-201ENST00000516373 109 ntBASIC22.72■■□□□ 1.23
PPP4R3AQ6IN85 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PPP4R3AQ6IN85 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
PPP4R3AQ6IN85 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC22.72■■□□□ 1.23
PPP4R3AQ6IN85 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC22.71■■□□□ 1.23
PPP4R3AQ6IN85 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PPP4R3AQ6IN85 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
PPP4R3AQ6IN85 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
PPP4R3AQ6IN85 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PPP4R3AQ6IN85 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC22.71■■□□□ 1.23
PPP4R3AQ6IN85 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC22.71■■□□□ 1.23
PPP4R3AQ6IN85 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC22.71■■□□□ 1.23
PPP4R3AQ6IN85 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PPP4R3AQ6IN85 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PPP4R3AQ6IN85 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PPP4R3AQ6IN85 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC22.71■■□□□ 1.23
PPP4R3AQ6IN85 AL390719.1-204ENST00000412397 1219 ntBASIC22.71■■□□□ 1.23
PPP4R3AQ6IN85 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC22.71■■□□□ 1.23
PPP4R3AQ6IN85 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC22.71■■□□□ 1.23
PPP4R3AQ6IN85 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
PPP4R3AQ6IN85 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC22.71■■□□□ 1.23
PPP4R3AQ6IN85 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC22.71■■□□□ 1.23
PPP4R3AQ6IN85 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PPP4R3AQ6IN85 BX119927.1-201ENST00000636596 1552 ntBASIC22.71■■□□□ 1.23
PPP4R3AQ6IN85 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
PPP4R3AQ6IN85 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
PPP4R3AQ6IN85 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC22.7■■□□□ 1.23
PPP4R3AQ6IN85 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC22.7■■□□□ 1.23
PPP4R3AQ6IN85 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms