Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CTSL3PQ5NE16 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CTSL3PQ5NE16 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CTSL3PQ5NE16 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTSL3PQ5NE16 AC098934.4-201ENST00000564127 592 ntBASIC19.76■□□□□ 0.75
CTSL3PQ5NE16 AL138781.1-201ENST00000566567 1274 ntBASIC19.76■□□□□ 0.75
CTSL3PQ5NE16 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.76■□□□□ 0.75
CTSL3PQ5NE16 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CTSL3PQ5NE16 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTSL3PQ5NE16 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTSL3PQ5NE16 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTSL3PQ5NE16 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTSL3PQ5NE16 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.76■□□□□ 0.75
CTSL3PQ5NE16 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CTSL3PQ5NE16 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CTSL3PQ5NE16 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CTSL3PQ5NE16 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTSL3PQ5NE16 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTSL3PQ5NE16 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTSL3PQ5NE16 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTSL3PQ5NE16 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.75■□□□□ 0.75
CTSL3PQ5NE16 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CTSL3PQ5NE16 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTSL3PQ5NE16 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CTSL3PQ5NE16 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.75■□□□□ 0.75
CTSL3PQ5NE16 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.75■□□□□ 0.75
CTSL3PQ5NE16 AC091874.3-201ENST00000512672 1195 ntBASIC19.75■□□□□ 0.75
CTSL3PQ5NE16 AC023632.3-201ENST00000521633 145 ntBASIC19.75■□□□□ 0.75
CTSL3PQ5NE16 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.75■□□□□ 0.75
CTSL3PQ5NE16 AL109923.1-201ENST00000618799 583 ntBASIC19.75■□□□□ 0.75
CTSL3PQ5NE16 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.75■□□□□ 0.75
CTSL3PQ5NE16 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTSL3PQ5NE16 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CTSL3PQ5NE16 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.75■□□□□ 0.75
CTSL3PQ5NE16 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTSL3PQ5NE16 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTSL3PQ5NE16 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTSL3PQ5NE16 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTSL3PQ5NE16 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.74■□□□□ 0.75
CTSL3PQ5NE16 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.74■□□□□ 0.75
CTSL3PQ5NE16 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CTSL3PQ5NE16 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.74■□□□□ 0.75
CTSL3PQ5NE16 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTSL3PQ5NE16 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CTSL3PQ5NE16 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.74■□□□□ 0.75
CTSL3PQ5NE16 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.74■□□□□ 0.75
CTSL3PQ5NE16 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.74■□□□□ 0.75
CTSL3PQ5NE16 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.74■□□□□ 0.75
CTSL3PQ5NE16 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTSL3PQ5NE16 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTSL3PQ5NE16 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.74■□□□□ 0.75
CTSL3PQ5NE16 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.74■□□□□ 0.75
CTSL3PQ5NE16 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
CTSL3PQ5NE16 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTSL3PQ5NE16 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTSL3PQ5NE16 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CTSL3PQ5NE16 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTSL3PQ5NE16 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
CTSL3PQ5NE16 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.74■□□□□ 0.75
CTSL3PQ5NE16 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CTSL3PQ5NE16 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTSL3PQ5NE16 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTSL3PQ5NE16 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CTSL3PQ5NE16 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTSL3PQ5NE16 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTSL3PQ5NE16 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.73■□□□□ 0.75
CTSL3PQ5NE16 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTSL3PQ5NE16 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTSL3PQ5NE16 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTSL3PQ5NE16 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTSL3PQ5NE16 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTSL3PQ5NE16 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTSL3PQ5NE16 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTSL3PQ5NE16 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.73■□□□□ 0.75
CTSL3PQ5NE16 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.73■□□□□ 0.75
CTSL3PQ5NE16 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CTSL3PQ5NE16 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.73■□□□□ 0.75
CTSL3PQ5NE16 AC104771.1-201ENST00000603335 964 ntBASIC19.73■□□□□ 0.75
CTSL3PQ5NE16 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.73■□□□□ 0.75
CTSL3PQ5NE16 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.73■□□□□ 0.75
CTSL3PQ5NE16 MYC-209ENST00000641252 345 ntBASIC19.73■□□□□ 0.75
CTSL3PQ5NE16 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTSL3PQ5NE16 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTSL3PQ5NE16 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.73■□□□□ 0.75
CTSL3PQ5NE16 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTSL3PQ5NE16 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTSL3PQ5NE16 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTSL3PQ5NE16 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTSL3PQ5NE16 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTSL3PQ5NE16 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTSL3PQ5NE16 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTSL3PQ5NE16 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTSL3PQ5NE16 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.72■□□□□ 0.75
CTSL3PQ5NE16 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.72■□□□□ 0.75
CTSL3PQ5NE16 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTSL3PQ5NE16 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTSL3PQ5NE16 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTSL3PQ5NE16 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTSL3PQ5NE16 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTSL3PQ5NE16 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms