Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SF3A2Q15428 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SF3A2Q15428 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.85■□□□□ 0.77
SF3A2Q15428 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.85■□□□□ 0.77
SF3A2Q15428 UPK3BP1-201ENST00000428678 509 ntBASIC19.85■□□□□ 0.77
SF3A2Q15428 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.85■□□□□ 0.77
SF3A2Q15428 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
SF3A2Q15428 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.85■□□□□ 0.77
SF3A2Q15428 AL121894.2-201ENST00000602977 491 ntBASIC19.85■□□□□ 0.77
SF3A2Q15428 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
SF3A2Q15428 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.85■□□□□ 0.77
SF3A2Q15428 CR392000.1-201ENST00000624770 1228 ntBASIC19.85■□□□□ 0.77
SF3A2Q15428 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.85■□□□□ 0.77
SF3A2Q15428 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SF3A2Q15428 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SF3A2Q15428 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SF3A2Q15428 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SF3A2Q15428 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SF3A2Q15428 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SF3A2Q15428 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SF3A2Q15428 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SF3A2Q15428 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
SF3A2Q15428 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SF3A2Q15428 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.84■□□□□ 0.77
SF3A2Q15428 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SF3A2Q15428 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.84■□□□□ 0.77
SF3A2Q15428 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SF3A2Q15428 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.84■□□□□ 0.77
SF3A2Q15428 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.84■□□□□ 0.77
SF3A2Q15428 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.84■□□□□ 0.77
SF3A2Q15428 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.84■□□□□ 0.77
SF3A2Q15428 AC004264.1-201ENST00000608354 794 ntBASIC19.84■□□□□ 0.77
SF3A2Q15428 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.84■□□□□ 0.77
SF3A2Q15428 AC006011.2-201ENST00000621313 1158 ntBASIC19.84■□□□□ 0.77
SF3A2Q15428 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SF3A2Q15428 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
SF3A2Q15428 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SF3A2Q15428 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SF3A2Q15428 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SF3A2Q15428 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.84■□□□□ 0.77
SF3A2Q15428 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SF3A2Q15428 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
SF3A2Q15428 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SF3A2Q15428 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SF3A2Q15428 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SF3A2Q15428 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SF3A2Q15428 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SF3A2Q15428 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.83■□□□□ 0.77
SF3A2Q15428 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SF3A2Q15428 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.83■□□□□ 0.77
SF3A2Q15428 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.83■□□□□ 0.77
SF3A2Q15428 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.83■□□□□ 0.77
SF3A2Q15428 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.83■□□□□ 0.77
SF3A2Q15428 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.83■□□□□ 0.76
SF3A2Q15428 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SF3A2Q15428 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SF3A2Q15428 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SF3A2Q15428 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SF3A2Q15428 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SF3A2Q15428 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.82■□□□□ 0.76
SF3A2Q15428 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SF3A2Q15428 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SF3A2Q15428 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SF3A2Q15428 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SF3A2Q15428 LIN28AP1-201ENST00000429574 405 ntBASIC19.82■□□□□ 0.76
SF3A2Q15428 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.82■□□□□ 0.76
SF3A2Q15428 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.82■□□□□ 0.76
SF3A2Q15428 AC116562.2-201ENST00000507042 360 ntBASIC19.82■□□□□ 0.76
SF3A2Q15428 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.82■□□□□ 0.76
SF3A2Q15428 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.82■□□□□ 0.76
SF3A2Q15428 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.82■□□□□ 0.76
SF3A2Q15428 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.82■□□□□ 0.76
SF3A2Q15428 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.82■□□□□ 0.76
SF3A2Q15428 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SF3A2Q15428 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SF3A2Q15428 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.82■□□□□ 0.76
SF3A2Q15428 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SF3A2Q15428 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SF3A2Q15428 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SF3A2Q15428 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.82■□□□□ 0.76
SF3A2Q15428 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SF3A2Q15428 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.81■□□□□ 0.76
SF3A2Q15428 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SF3A2Q15428 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SF3A2Q15428 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SF3A2Q15428 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SF3A2Q15428 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.81■□□□□ 0.76
SF3A2Q15428 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.81■□□□□ 0.76
SF3A2Q15428 ATP5G1P1-201ENST00000448724 379 ntBASIC19.81■□□□□ 0.76
SF3A2Q15428 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.81■□□□□ 0.76
SF3A2Q15428 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
SF3A2Q15428 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.81■□□□□ 0.76
SF3A2Q15428 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.81■□□□□ 0.76
SF3A2Q15428 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SF3A2Q15428 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SF3A2Q15428 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.81■□□□□ 0.76
SF3A2Q15428 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SF3A2Q15428 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SF3A2Q15428 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SF3A2Q15428 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms