Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPS4XP62701 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RPS4XP62701 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RPS4XP62701 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPS4XP62701 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPS4XP62701 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPS4XP62701 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RPS4XP62701 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
RPS4XP62701 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RPS4XP62701 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RPS4XP62701 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPS4XP62701 AC073210.2-201ENST00000430369 194 ntBASIC18.09■□□□□ 0.49
RPS4XP62701 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RPS4XP62701 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.09■□□□□ 0.49
RPS4XP62701 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
RPS4XP62701 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPS4XP62701 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPS4XP62701 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
RPS4XP62701 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPS4XP62701 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPS4XP62701 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPS4XP62701 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RPS4XP62701 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.08■□□□□ 0.49
RPS4XP62701 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RPS4XP62701 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RPS4XP62701 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RPS4XP62701 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.08■□□□□ 0.48
RPS4XP62701 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RPS4XP62701 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.08■□□□□ 0.48
RPS4XP62701 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.08■□□□□ 0.48
RPS4XP62701 CYP2T1P-201ENST00000432607 1285 ntBASIC18.08■□□□□ 0.48
RPS4XP62701 FAM201B-201ENST00000458407 597 ntBASIC18.08■□□□□ 0.48
RPS4XP62701 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RPS4XP62701 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.08■□□□□ 0.48
RPS4XP62701 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
RPS4XP62701 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.08■□□□□ 0.48
RPS4XP62701 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.08■□□□□ 0.48
RPS4XP62701 MIR4758-201ENST00000577688 71 ntBASIC18.08■□□□□ 0.48
RPS4XP62701 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
RPS4XP62701 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.08■□□□□ 0.48
RPS4XP62701 AC008694.1-202ENST00000636953 945 ntBASIC18.08■□□□□ 0.48
RPS4XP62701 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RPS4XP62701 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RPS4XP62701 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.08■□□□□ 0.48
RPS4XP62701 TMEM179-206ENST00000616017 1645 ntBASIC18.08■□□□□ 0.48
RPS4XP62701 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RPS4XP62701 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RPS4XP62701 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
RPS4XP62701 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.08■□□□□ 0.48
RPS4XP62701 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RPS4XP62701 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RPS4XP62701 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RPS4XP62701 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPS4XP62701 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPS4XP62701 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.07■□□□□ 0.48
RPS4XP62701 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPS4XP62701 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPS4XP62701 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPS4XP62701 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPS4XP62701 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.07■□□□□ 0.48
RPS4XP62701 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPS4XP62701 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.07■□□□□ 0.48
RPS4XP62701 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.07■□□□□ 0.48
RPS4XP62701 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.07■□□□□ 0.48
RPS4XP62701 AC105020.6-201ENST00000621523 1217 ntBASIC18.07■□□□□ 0.48
RPS4XP62701 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPS4XP62701 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPS4XP62701 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RPS4XP62701 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPS4XP62701 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RPS4XP62701 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.07■□□□□ 0.48
RPS4XP62701 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPS4XP62701 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.07■□□□□ 0.48
RPS4XP62701 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.06■□□□□ 0.48
RPS4XP62701 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RPS4XP62701 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.06■□□□□ 0.48
RPS4XP62701 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
RPS4XP62701 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPS4XP62701 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPS4XP62701 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPS4XP62701 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.06■□□□□ 0.48
RPS4XP62701 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.06■□□□□ 0.48
RPS4XP62701 AC069236.1-201ENST00000604339 616 ntBASIC18.06■□□□□ 0.48
RPS4XP62701 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.06■□□□□ 0.48
RPS4XP62701 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.06■□□□□ 0.48
RPS4XP62701 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPS4XP62701 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RPS4XP62701 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.06■□□□□ 0.48
RPS4XP62701 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPS4XP62701 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RPS4XP62701 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPS4XP62701 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.05■□□□□ 0.48
RPS4XP62701 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPS4XP62701 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RPS4XP62701 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RPS4XP62701 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPS4XP62701 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPS4XP62701 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.05■□□□□ 0.48
RPS4XP62701 MKRN4P-201ENST00000444706 1521 ntBASIC18.05■□□□□ 0.48
RPS4XP62701 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms