Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
USP46P62068 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.08■□□□□ 0.97
USP46P62068 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.08■□□□□ 0.97
USP46P62068 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.08■□□□□ 0.97
USP46P62068 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.08■□□□□ 0.97
USP46P62068 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.08■□□□□ 0.97
USP46P62068 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP46P62068 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.08■□□□□ 0.97
USP46P62068 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.08■□□□□ 0.96
USP46P62068 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.08■□□□□ 0.96
USP46P62068 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
USP46P62068 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.08■□□□□ 0.96
USP46P62068 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.08■□□□□ 0.96
USP46P62068 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.07■□□□□ 0.96
USP46P62068 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
USP46P62068 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
USP46P62068 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
USP46P62068 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP46P62068 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
USP46P62068 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP46P62068 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.07■□□□□ 0.96
USP46P62068 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP46P62068 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.07■□□□□ 0.96
USP46P62068 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
USP46P62068 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.07■□□□□ 0.96
USP46P62068 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.07■□□□□ 0.96
USP46P62068 FAM197Y4-202ENST00000622692 608 ntBASIC21.07■□□□□ 0.96
USP46P62068 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.07■□□□□ 0.96
USP46P62068 AL023875.1-201ENST00000640777 796 ntBASIC21.07■□□□□ 0.96
USP46P62068 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP46P62068 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
USP46P62068 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP46P62068 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP46P62068 AL391422.3-201ENST00000603791 2761 ntBASIC21.07■□□□□ 0.96
USP46P62068 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP46P62068 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP46P62068 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP46P62068 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP46P62068 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
USP46P62068 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.06■□□□□ 0.96
USP46P62068 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP46P62068 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP46P62068 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.06■□□□□ 0.96
USP46P62068 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP46P62068 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.06■□□□□ 0.96
USP46P62068 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP46P62068 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
USP46P62068 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP46P62068 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.06■□□□□ 0.96
USP46P62068 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP46P62068 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP46P62068 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
USP46P62068 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP46P62068 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP46P62068 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
USP46P62068 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.05■□□□□ 0.96
USP46P62068 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP46P62068 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
USP46P62068 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
USP46P62068 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.05■□□□□ 0.96
USP46P62068 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP46P62068 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.05■□□□□ 0.96
USP46P62068 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.05■□□□□ 0.96
USP46P62068 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
USP46P62068 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.05■□□□□ 0.96
USP46P62068 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.05■□□□□ 0.96
USP46P62068 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
USP46P62068 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.05■□□□□ 0.96
USP46P62068 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
USP46P62068 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.05■□□□□ 0.96
USP46P62068 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
USP46P62068 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.05■□□□□ 0.96
USP46P62068 AP006294.2-201ENST00000641667 209 ntBASIC21.05■□□□□ 0.96
USP46P62068 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.05■□□□□ 0.96
USP46P62068 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
USP46P62068 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.05■□□□□ 0.96
USP46P62068 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP46P62068 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP46P62068 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP46P62068 DPP3P2-201ENST00000416030 1696 ntBASIC21.05■□□□□ 0.96
USP46P62068 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP46P62068 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
USP46P62068 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
USP46P62068 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
USP46P62068 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
USP46P62068 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP46P62068 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP46P62068 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.04■□□□□ 0.96
USP46P62068 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP46P62068 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP46P62068 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.04■□□□□ 0.96
USP46P62068 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP46P62068 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP46P62068 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
USP46P62068 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP46P62068 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.04■□□□□ 0.96
USP46P62068 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP46P62068 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.04■□□□□ 0.96
USP46P62068 UBE2SP1-201ENST00000450587 669 ntBASIC21.04■□□□□ 0.96
USP46P62068 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms