Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC23.83■■□□□ 1.41
RHBDL3P58872 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC23.83■■□□□ 1.41
RHBDL3P58872 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
RHBDL3P58872 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC23.83■■□□□ 1.41
RHBDL3P58872 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
RHBDL3P58872 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC23.83■■□□□ 1.4
RHBDL3P58872 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
RHBDL3P58872 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
RHBDL3P58872 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
RHBDL3P58872 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC23.82■■□□□ 1.4
RHBDL3P58872 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC23.82■■□□□ 1.4
RHBDL3P58872 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RHBDL3P58872 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RHBDL3P58872 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC23.82■■□□□ 1.4
RHBDL3P58872 AL355075.4-201ENST00000554988 638 ntBASIC23.82■■□□□ 1.4
RHBDL3P58872 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RHBDL3P58872 SNX21-213ENST00000614929 587 ntTSL 5 BASIC23.82■■□□□ 1.4
RHBDL3P58872 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RHBDL3P58872 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RHBDL3P58872 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RHBDL3P58872 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RHBDL3P58872 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RHBDL3P58872 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC23.82■■□□□ 1.4
RHBDL3P58872 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC23.81■■□□□ 1.4
RHBDL3P58872 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RHBDL3P58872 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC23.81■■□□□ 1.4
RHBDL3P58872 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RHBDL3P58872 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC23.81■■□□□ 1.4
RHBDL3P58872 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RHBDL3P58872 FDX2-207ENST00000494368 584 ntTSL 4 BASIC23.81■■□□□ 1.4
RHBDL3P58872 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RHBDL3P58872 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC23.81■■□□□ 1.4
RHBDL3P58872 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC23.81■■□□□ 1.4
RHBDL3P58872 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC23.81■■□□□ 1.4
RHBDL3P58872 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RHBDL3P58872 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
RHBDL3P58872 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC23.81■■□□□ 1.4
RHBDL3P58872 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
RHBDL3P58872 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC23.8■■□□□ 1.4
RHBDL3P58872 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RHBDL3P58872 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RHBDL3P58872 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC23.8■■□□□ 1.4
RHBDL3P58872 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC23.8■■□□□ 1.4
RHBDL3P58872 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC23.8■■□□□ 1.4
RHBDL3P58872 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RHBDL3P58872 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RHBDL3P58872 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC23.8■■□□□ 1.4
RHBDL3P58872 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC23.8■■□□□ 1.4
RHBDL3P58872 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC23.8■■□□□ 1.4
RHBDL3P58872 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RHBDL3P58872 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
RHBDL3P58872 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
RHBDL3P58872 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RHBDL3P58872 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC23.79■■□□□ 1.4
RHBDL3P58872 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC23.79■■□□□ 1.4
RHBDL3P58872 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.79■■□□□ 1.4
RHBDL3P58872 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RHBDL3P58872 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RHBDL3P58872 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC23.79■■□□□ 1.4
RHBDL3P58872 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC23.79■■□□□ 1.4
RHBDL3P58872 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC23.79■■□□□ 1.4
RHBDL3P58872 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC23.79■■□□□ 1.4
RHBDL3P58872 RPS15-203ENST00000586096 570 ntTSL 2 BASIC23.79■■□□□ 1.4
RHBDL3P58872 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC23.79■■□□□ 1.4
RHBDL3P58872 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC23.79■■□□□ 1.4
RHBDL3P58872 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RHBDL3P58872 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RHBDL3P58872 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
RHBDL3P58872 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC23.78■■□□□ 1.4
RHBDL3P58872 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC23.78■■□□□ 1.4
RHBDL3P58872 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RHBDL3P58872 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC23.78■■□□□ 1.4
RHBDL3P58872 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
RHBDL3P58872 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC23.78■■□□□ 1.4
RHBDL3P58872 AC026471.5-201ENST00000615068 467 ntBASIC23.78■■□□□ 1.4
RHBDL3P58872 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
RHBDL3P58872 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
RHBDL3P58872 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
RHBDL3P58872 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
RHBDL3P58872 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
RHBDL3P58872 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.78■■□□□ 1.4
RHBDL3P58872 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RHBDL3P58872 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RHBDL3P58872 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RHBDL3P58872 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
RHBDL3P58872 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RHBDL3P58872 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RHBDL3P58872 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RHBDL3P58872 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RHBDL3P58872 CALM3-202ENST00000391918 702 ntTSL 2 BASIC23.77■■□□□ 1.4
RHBDL3P58872 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC23.77■■□□□ 1.4
RHBDL3P58872 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RHBDL3P58872 CD177P1-201ENST00000606252 935 ntBASIC23.77■■□□□ 1.4
RHBDL3P58872 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC23.77■■□□□ 1.4
RHBDL3P58872 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC23.77■■□□□ 1.4
RHBDL3P58872 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RHBDL3P58872 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RHBDL3P58872 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RHBDL3P58872 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RHBDL3P58872 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms