Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.16■□□□□ 0.5
SUMO3P55854 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.16■□□□□ 0.5
SUMO3P55854 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.16■□□□□ 0.5
SUMO3P55854 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.16■□□□□ 0.5
SUMO3P55854 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.16■□□□□ 0.5
SUMO3P55854 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.16■□□□□ 0.5
SUMO3P55854 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.16■□□□□ 0.5
SUMO3P55854 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.16■□□□□ 0.5
SUMO3P55854 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SUMO3P55854 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.16■□□□□ 0.5
SUMO3P55854 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SUMO3P55854 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SUMO3P55854 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SUMO3P55854 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.16■□□□□ 0.5
SUMO3P55854 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.16■□□□□ 0.5
SUMO3P55854 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SUMO3P55854 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.15■□□□□ 0.5
SUMO3P55854 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SUMO3P55854 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SUMO3P55854 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SUMO3P55854 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SUMO3P55854 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SUMO3P55854 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SUMO3P55854 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SUMO3P55854 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.15■□□□□ 0.5
SUMO3P55854 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.15■□□□□ 0.5
SUMO3P55854 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.15■□□□□ 0.5
SUMO3P55854 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.15■□□□□ 0.5
SUMO3P55854 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.15■□□□□ 0.5
SUMO3P55854 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SUMO3P55854 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
SUMO3P55854 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
SUMO3P55854 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SUMO3P55854 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SUMO3P55854 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SUMO3P55854 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SUMO3P55854 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
SUMO3P55854 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.14■□□□□ 0.5
SUMO3P55854 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.14■□□□□ 0.5
SUMO3P55854 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SUMO3P55854 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SUMO3P55854 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SUMO3P55854 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SUMO3P55854 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SUMO3P55854 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SUMO3P55854 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.14■□□□□ 0.49
SUMO3P55854 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.14■□□□□ 0.49
SUMO3P55854 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.14■□□□□ 0.49
SUMO3P55854 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.14■□□□□ 0.49
SUMO3P55854 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.14■□□□□ 0.49
SUMO3P55854 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.14■□□□□ 0.49
SUMO3P55854 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.14■□□□□ 0.49
SUMO3P55854 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.14■□□□□ 0.49
SUMO3P55854 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
SUMO3P55854 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SUMO3P55854 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
SUMO3P55854 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.14■□□□□ 0.49
SUMO3P55854 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.14■□□□□ 0.49
SUMO3P55854 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SUMO3P55854 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SUMO3P55854 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SUMO3P55854 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SUMO3P55854 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SUMO3P55854 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SUMO3P55854 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.13■□□□□ 0.49
SUMO3P55854 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SUMO3P55854 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SUMO3P55854 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SUMO3P55854 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.13■□□□□ 0.49
SUMO3P55854 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SUMO3P55854 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SUMO3P55854 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SUMO3P55854 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SUMO3P55854 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SUMO3P55854 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SUMO3P55854 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.13■□□□□ 0.49
SUMO3P55854 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SUMO3P55854 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.13■□□□□ 0.49
SUMO3P55854 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SUMO3P55854 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
SUMO3P55854 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SUMO3P55854 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SUMO3P55854 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
SUMO3P55854 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.13■□□□□ 0.49
SUMO3P55854 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SUMO3P55854 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.12■□□□□ 0.49
SUMO3P55854 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SUMO3P55854 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SUMO3P55854 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SUMO3P55854 TCF3P1-201ENST00000423021 1937 ntBASIC18.12■□□□□ 0.49
SUMO3P55854 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SUMO3P55854 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SUMO3P55854 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SUMO3P55854 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SUMO3P55854 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.12■□□□□ 0.49
SUMO3P55854 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.12■□□□□ 0.49
SUMO3P55854 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SUMO3P55854 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.12■□□□□ 0.49
SUMO3P55854 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.12■□□□□ 0.49
SUMO3P55854 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms