Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CDH12P55289 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CDH12P55289 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDH12P55289 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH12P55289 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CDH12P55289 AC097381.1-201ENST00000429019 1296 ntBASIC18.62■□□□□ 0.57
CDH12P55289 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.62■□□□□ 0.57
CDH12P55289 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
CDH12P55289 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.62■□□□□ 0.57
CDH12P55289 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH12P55289 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH12P55289 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH12P55289 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH12P55289 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
CDH12P55289 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
CDH12P55289 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CDH12P55289 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH12P55289 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH12P55289 AL020996.1-203ENST00000536896 2307 ntBASIC18.61■□□□□ 0.57
CDH12P55289 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.61■□□□□ 0.57
CDH12P55289 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH12P55289 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH12P55289 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDH12P55289 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.61■□□□□ 0.57
CDH12P55289 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDH12P55289 KRT8P36-201ENST00000489121 1440 ntBASIC18.61■□□□□ 0.57
CDH12P55289 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.61■□□□□ 0.57
CDH12P55289 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH12P55289 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CDH12P55289 AC034268.1-201ENST00000441047 882 ntBASIC18.61■□□□□ 0.57
CDH12P55289 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.61■□□□□ 0.57
CDH12P55289 MYCNOS-205ENST00000641950 531 ntBASIC18.61■□□□□ 0.57
CDH12P55289 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH12P55289 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH12P55289 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH12P55289 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CDH12P55289 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH12P55289 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.6■□□□□ 0.57
CDH12P55289 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH12P55289 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH12P55289 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH12P55289 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH12P55289 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH12P55289 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH12P55289 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH12P55289 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CDH12P55289 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH12P55289 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH12P55289 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CDH12P55289 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH12P55289 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH12P55289 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.6■□□□□ 0.57
CDH12P55289 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.6■□□□□ 0.57
CDH12P55289 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH12P55289 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH12P55289 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.6■□□□□ 0.57
CDH12P55289 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.6■□□□□ 0.57
CDH12P55289 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH12P55289 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.6■□□□□ 0.57
CDH12P55289 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH12P55289 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH12P55289 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH12P55289 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.6■□□□□ 0.57
CDH12P55289 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH12P55289 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.6■□□□□ 0.57
CDH12P55289 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH12P55289 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
CDH12P55289 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDH12P55289 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.59■□□□□ 0.57
CDH12P55289 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH12P55289 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.59■□□□□ 0.57
CDH12P55289 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CDH12P55289 AC098818.2-201ENST00000564925 2320 ntBASIC18.59■□□□□ 0.57
CDH12P55289 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH12P55289 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
CDH12P55289 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.59■□□□□ 0.57
CDH12P55289 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.59■□□□□ 0.57
CDH12P55289 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
CDH12P55289 MIR6821-201ENST00000617625 74 ntBASIC18.59■□□□□ 0.57
CDH12P55289 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CDH12P55289 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH12P55289 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CDH12P55289 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.59■□□□□ 0.57
CDH12P55289 TMEM179-206ENST00000616017 1645 ntBASIC18.59■□□□□ 0.57
CDH12P55289 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.59■□□□□ 0.57
CDH12P55289 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDH12P55289 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH12P55289 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDH12P55289 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
CDH12P55289 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDH12P55289 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDH12P55289 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.58■□□□□ 0.57
CDH12P55289 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.58■□□□□ 0.56
CDH12P55289 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH12P55289 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.58■□□□□ 0.56
CDH12P55289 AC087623.3-201ENST00000607047 1098 ntBASIC18.58■□□□□ 0.56
CDH12P55289 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CDH12P55289 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDH12P55289 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDH12P55289 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms