Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDH6P55285 MKRN4P-201ENST00000444706 1521 ntBASIC20.83■□□□□ 0.93
CDH6P55285 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.83■□□□□ 0.93
CDH6P55285 AL691432.2-201ENST00000607222 2038 ntBASIC20.83■□□□□ 0.93
CDH6P55285 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.83■□□□□ 0.93
CDH6P55285 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDH6P55285 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDH6P55285 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CDH6P55285 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CDH6P55285 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDH6P55285 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
CDH6P55285 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.83■□□□□ 0.93
CDH6P55285 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDH6P55285 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
CDH6P55285 AC006970.2-201ENST00000450065 779 ntBASIC20.83■□□□□ 0.93
CDH6P55285 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.83■□□□□ 0.93
CDH6P55285 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.83■□□□□ 0.93
CDH6P55285 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.83■□□□□ 0.93
CDH6P55285 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.83■□□□□ 0.93
CDH6P55285 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.83■□□□□ 0.93
CDH6P55285 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CDH6P55285 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.83■□□□□ 0.92
CDH6P55285 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
CDH6P55285 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.83■□□□□ 0.92
CDH6P55285 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CDH6P55285 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.82■□□□□ 0.92
CDH6P55285 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH6P55285 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH6P55285 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CDH6P55285 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.82■□□□□ 0.92
CDH6P55285 LSM12P1-201ENST00000411836 588 ntBASIC20.82■□□□□ 0.92
CDH6P55285 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.82■□□□□ 0.92
CDH6P55285 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH6P55285 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH6P55285 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH6P55285 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.82■□□□□ 0.92
CDH6P55285 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH6P55285 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH6P55285 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
CDH6P55285 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.82■□□□□ 0.92
CDH6P55285 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH6P55285 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH6P55285 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDH6P55285 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH6P55285 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH6P55285 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH6P55285 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
CDH6P55285 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.81■□□□□ 0.92
CDH6P55285 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH6P55285 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH6P55285 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDH6P55285 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.81■□□□□ 0.92
CDH6P55285 C2orf69P4-201ENST00000565394 541 ntBASIC20.81■□□□□ 0.92
CDH6P55285 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.81■□□□□ 0.92
CDH6P55285 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDH6P55285 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH6P55285 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH6P55285 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.81■□□□□ 0.92
CDH6P55285 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH6P55285 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDH6P55285 KRT8P17-201ENST00000453110 1448 ntBASIC20.8■□□□□ 0.92
CDH6P55285 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CDH6P55285 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDH6P55285 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDH6P55285 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.8■□□□□ 0.92
CDH6P55285 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.8■□□□□ 0.92
CDH6P55285 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.8■□□□□ 0.92
CDH6P55285 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.8■□□□□ 0.92
CDH6P55285 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.8■□□□□ 0.92
CDH6P55285 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.8■□□□□ 0.92
CDH6P55285 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDH6P55285 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDH6P55285 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CDH6P55285 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDH6P55285 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDH6P55285 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.8■□□□□ 0.92
CDH6P55285 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDH6P55285 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.79■□□□□ 0.92
CDH6P55285 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH6P55285 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH6P55285 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
CDH6P55285 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH6P55285 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CDH6P55285 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CDH6P55285 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH6P55285 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH6P55285 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH6P55285 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.79■□□□□ 0.92
CDH6P55285 BX276092.2-201ENST00000417668 665 ntBASIC20.79■□□□□ 0.92
CDH6P55285 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.79■□□□□ 0.92
CDH6P55285 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.79■□□□□ 0.92
CDH6P55285 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH6P55285 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH6P55285 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH6P55285 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.79■□□□□ 0.92
CDH6P55285 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.79■□□□□ 0.92
CDH6P55285 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH6P55285 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDH6P55285 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH6P55285 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms