Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
NR1H2P55055 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
NR1H2P55055 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NR1H2P55055 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
NR1H2P55055 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
NR1H2P55055 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.91■□□□□ 0.62
NR1H2P55055 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.91■□□□□ 0.62
NR1H2P55055 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NR1H2P55055 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.91■□□□□ 0.62
NR1H2P55055 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NR1H2P55055 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.91■□□□□ 0.62
NR1H2P55055 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
NR1H2P55055 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.91■□□□□ 0.62
NR1H2P55055 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NR1H2P55055 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NR1H2P55055 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.91■□□□□ 0.62
NR1H2P55055 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.91■□□□□ 0.62
NR1H2P55055 TPRG1LP1-201ENST00000598702 760 ntBASIC18.91■□□□□ 0.62
NR1H2P55055 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.91■□□□□ 0.62
NR1H2P55055 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
NR1H2P55055 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.91■□□□□ 0.62
NR1H2P55055 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NR1H2P55055 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NR1H2P55055 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NR1H2P55055 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NR1H2P55055 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
NR1H2P55055 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.9■□□□□ 0.62
NR1H2P55055 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NR1H2P55055 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
NR1H2P55055 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
NR1H2P55055 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NR1H2P55055 FP700111.2-201ENST00000619190 1892 ntBASIC18.9■□□□□ 0.62
NR1H2P55055 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NR1H2P55055 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
NR1H2P55055 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NR1H2P55055 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.9■□□□□ 0.62
NR1H2P55055 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.9■□□□□ 0.62
NR1H2P55055 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
NR1H2P55055 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.9■□□□□ 0.62
NR1H2P55055 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NR1H2P55055 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.9■□□□□ 0.62
NR1H2P55055 AC003102.1-202ENST00000563394 1796 ntBASIC18.9■□□□□ 0.62
NR1H2P55055 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NR1H2P55055 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.9■□□□□ 0.62
NR1H2P55055 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NR1H2P55055 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NR1H2P55055 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
NR1H2P55055 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
NR1H2P55055 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NR1H2P55055 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NR1H2P55055 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NR1H2P55055 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
NR1H2P55055 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.89■□□□□ 0.61
NR1H2P55055 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
NR1H2P55055 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NR1H2P55055 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.89■□□□□ 0.61
NR1H2P55055 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NR1H2P55055 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NR1H2P55055 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NR1H2P55055 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.89■□□□□ 0.61
NR1H2P55055 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.89■□□□□ 0.61
NR1H2P55055 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.89■□□□□ 0.61
NR1H2P55055 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NR1H2P55055 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.89■□□□□ 0.61
NR1H2P55055 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
NR1H2P55055 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.89■□□□□ 0.61
NR1H2P55055 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NR1H2P55055 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NR1H2P55055 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NR1H2P55055 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NR1H2P55055 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NR1H2P55055 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NR1H2P55055 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NR1H2P55055 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
NR1H2P55055 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NR1H2P55055 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
NR1H2P55055 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NR1H2P55055 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
NR1H2P55055 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NR1H2P55055 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
NR1H2P55055 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NR1H2P55055 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NR1H2P55055 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.88■□□□□ 0.61
NR1H2P55055 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
NR1H2P55055 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NR1H2P55055 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
NR1H2P55055 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NR1H2P55055 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NR1H2P55055 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
NR1H2P55055 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
NR1H2P55055 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.88■□□□□ 0.61
NR1H2P55055 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.87■□□□□ 0.61
NR1H2P55055 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NR1H2P55055 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
NR1H2P55055 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NR1H2P55055 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
NR1H2P55055 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NR1H2P55055 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NR1H2P55055 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
NR1H2P55055 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms