Protein–RNA interactions for Protein: P53859

CSL4, Exosome complex component CSL4, yeastyeast

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CSL4P53859 YOR072W-BYOR072W-B 162 nt1.33□□□□□ -2.2
CSL4P53859 MSN5YDR335W 3675 nt1.33□□□□□ -2.2
CSL4P53859 DOP1YDR141C 5097 nt1.32□□□□□ -2.2
CSL4P53859 GEA2YEL022W 4380 nt1.32□□□□□ -2.2
CSL4P53859 snR74snR74 88 nt1.32□□□□□ -2.2
CSL4P53859 snR80snR80 171 nt1.32□□□□□ -2.2
CSL4P53859 tH(GUG)E1tH(GUG)E1 72 nt1.32□□□□□ -2.2
CSL4P53859 tH(GUG)E2tH(GUG)E2 72 nt1.32□□□□□ -2.2
CSL4P53859 tH(GUG)G1tH(GUG)G1 72 nt1.32□□□□□ -2.2
CSL4P53859 tH(GUG)G2tH(GUG)G2 72 nt1.32□□□□□ -2.2
CSL4P53859 tH(GUG)HtH(GUG)H 72 nt1.32□□□□□ -2.2
CSL4P53859 tH(GUG)KtH(GUG)K 72 nt1.32□□□□□ -2.2
CSL4P53859 tH(GUG)MtH(GUG)M 72 nt1.32□□□□□ -2.2
CSL4P53859 YMR158W-BYMR158W-B 321 nt1.32□□□□□ -2.2
CSL4P53859 PIK1YNL267W 3201 nt1.32□□□□□ -2.2
CSL4P53859 tF(GAA)BtF(GAA)B 73 nt1.31□□□□□ -2.2
CSL4P53859 tF(GAA)FtF(GAA)F 73 nt1.31□□□□□ -2.2
CSL4P53859 tF(GAA)GtF(GAA)G 73 nt1.31□□□□□ -2.2
CSL4P53859 tF(GAA)H1tF(GAA)H1 73 nt1.31□□□□□ -2.2
CSL4P53859 tF(GAA)H2tF(GAA)H2 73 nt1.31□□□□□ -2.2
CSL4P53859 tF(GAA)MtF(GAA)M 73 nt1.31□□□□□ -2.2
CSL4P53859 tF(GAA)P1tF(GAA)P1 73 nt1.31□□□□□ -2.2
CSL4P53859 tF(GAA)P2tF(GAA)P2 73 nt1.31□□□□□ -2.2
CSL4P53859 OLI1Q0130 231 nt1.31□□□□□ -2.2
CSL4P53859 tV(UAC)BtV(UAC)B 74 nt1.31□□□□□ -2.2
CSL4P53859 tV(UAC)DtV(UAC)D 74 nt1.31□□□□□ -2.2
CSL4P53859 SEC21YNL287W 2808 nt1.3□□□□□ -2.2
CSL4P53859 POL5YEL055C 3069 nt1.3□□□□□ -2.2
CSL4P53859 YLL019W-AYLL019W-A 93 nt1.3□□□□□ -2.2
CSL4P53859 RRT15YLR162W-A 189 nt1.3□□□□□ -2.2
CSL4P53859 SEC3YER008C 4011 nt1.29□□□□□ -2.2
CSL4P53859 tF(GAA)QtF(GAA)Q 75 nt1.29□□□□□ -2.2
CSL4P53859 HKR1YDR420W 5409 nt1.29□□□□□ -2.2
CSL4P53859 EAF1YDR359C 2949 nt1.29□□□□□ -2.2
CSL4P53859 YDR354C-AYDR354C-A 144 nt1.28□□□□□ -2.2
CSL4P53859 CDC25YLR310C 4770 nt1.27□□□□□ -2.21
CSL4P53859 PET127YOR017W 2403 nt1.27□□□□□ -2.21
CSL4P53859 TTI1YKL033W 3117 nt1.27□□□□□ -2.21
CSL4P53859 STB6YKL072W 2301 nt1.26□□□□□ -2.21
CSL4P53859 NPR2YEL062W 1848 nt1.26□□□□□ -2.21
CSL4P53859 YBR182C-AYBR182C-A 195 nt1.25□□□□□ -2.21
CSL4P53859 YKU70YMR284W 1809 nt1.24□□□□□ -2.21
CSL4P53859 YIR030W-AYIR030W-A 384 nt1.24□□□□□ -2.21
CSL4P53859 YNL211CYNL211C 261 nt1.24□□□□□ -2.21
CSL4P53859 RSM22YKL155C 1887 nt1.24□□□□□ -2.21
CSL4P53859 CDC39YCR093W 6327 nt1.23□□□□□ -2.21
CSL4P53859 APL1YJR005W 2103 nt1.23□□□□□ -2.21
CSL4P53859 CMC4YMR194C-B 222 nt1.23□□□□□ -2.21
CSL4P53859 YDL196WYDL196W 330 nt1.22□□□□□ -2.21
CSL4P53859 PAA1YDR071C 576 nt1.22□□□□□ -2.21
CSL4P53859 NUP157YER105C 4176 nt1.22□□□□□ -2.21
CSL4P53859 NOP9YJL010C 2001 nt1.21□□□□□ -2.22
CSL4P53859 BUD3YCL014W 4911 nt1.2□□□□□ -2.22
CSL4P53859 YJL026C-AYJL026C-A 222 nt1.2□□□□□ -2.22
CSL4P53859 PAM16YJL104W 450 nt1.2□□□□□ -2.22
CSL4P53859 YPL044CYPL044C 549 nt1.2□□□□□ -2.22
CSL4P53859 ISD11YER048W-A 285 nt1.19□□□□□ -2.22
CSL4P53859 YAL067W-AYAL067W-A 228 nt1.19□□□□□ -2.22
CSL4P53859 YOR302WYOR302W 78 nt1.19□□□□□ -2.22
CSL4P53859 UTP20YBL004W 7482 nt1.18□□□□□ -2.22
CSL4P53859 SPG3YDR504C 384 nt1.17□□□□□ -2.22
CSL4P53859 RAD9YDR217C 3930 nt1.16□□□□□ -2.22
CSL4P53859 ULI1YFR026C 510 nt1.16□□□□□ -2.22
CSL4P53859 ROM2YLR371W 4071 nt1.16□□□□□ -2.22
CSL4P53859 UBP3YER151C 2739 nt1.16□□□□□ -2.22
CSL4P53859 SIP4YJL089W 2490 nt1.15□□□□□ -2.22
CSL4P53859 YCR018C-AYCR018C-A 255 nt1.15□□□□□ -2.23
CSL4P53859 RPL33BYOR234C 324 nt1.15□□□□□ -2.23
CSL4P53859 SAC3YDR159W 3906 nt1.14□□□□□ -2.23
CSL4P53859 RPL26BYGR034W 384 nt1.14□□□□□ -2.23
CSL4P53859 YOL014WYOL014W 375 nt1.14□□□□□ -2.23
CSL4P53859 YOR345CYOR345C 351 nt1.14□□□□□ -2.23
CSL4P53859 YBR131C-AYBR131C-A 90 nt1.13□□□□□ -2.23
CSL4P53859 YFR012W-AYFR012W-A 87 nt1.12□□□□□ -2.23
CSL4P53859 JLP2YMR132C 627 nt1.12□□□□□ -2.23
CSL4P53859 BLI1YKL061W 342 nt1.11□□□□□ -2.23
CSL4P53859 COY1YKL179C 2040 nt1.11□□□□□ -2.23
CSL4P53859 YDL185C-AYDL185C-A 228 nt1.1□□□□□ -2.23
CSL4P53859 SPT7YBR081C 3999 nt1.1□□□□□ -2.23
CSL4P53859 YMR046W-AYMR046W-A 129 nt1.09□□□□□ -2.23
CSL4P53859 BEM2YER155C 6504 nt1.08□□□□□ -2.24
CSL4P53859 YGL123C-AYGL123C-A 231 nt1.08□□□□□ -2.24
CSL4P53859 YIL020C-AYIL020C-A 339 nt1.08□□□□□ -2.24
CSL4P53859 YEL014CYEL014C 306 nt1.07□□□□□ -2.24
CSL4P53859 tM(CAU)Q1tM(CAU)Q1 76 nt1.07□□□□□ -2.24
CSL4P53859 APQ12YIL040W 417 nt1.07□□□□□ -2.24
CSL4P53859 COX12YLR038C 252 nt1.07□□□□□ -2.24
CSL4P53859 YLR282CYLR282C 342 nt1.07□□□□□ -2.24
CSL4P53859 snR190snR190 190 nt1.07□□□□□ -2.24
CSL4P53859 YCR038W-AYCR038W-A 126 nt1.06□□□□□ -2.24
CSL4P53859 YDR406W-AYDR406W-A 246 nt1.06□□□□□ -2.24
CSL4P53859 BFR2YDR299W 1605 nt1.06□□□□□ -2.24
CSL4P53859 KAP120YPL125W 3099 nt1.06□□□□□ -2.24
CSL4P53859 BIR1YJR089W 2865 nt1.05□□□□□ -2.24
CSL4P53859 YKL100W-AYKL100W-A 90 nt1.05□□□□□ -2.24
CSL4P53859 YOR161W-AYOR161W-A 81 nt1.05□□□□□ -2.24
CSL4P53859 ASE1YOR058C 2658 nt1.05□□□□□ -2.24
CSL4P53859 YIL134C-AYIL134C-A 204 nt1.04□□□□□ -2.24
CSL4P53859 YNL097C-BYNL097C-B 123 nt1.03□□□□□ -2.24
CSL4P53859 PMP1YCR024C-A 123 nt1.02□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 27.2 ms