Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 YKL118WYKL118W 312 nt0.63□□□□□ -2.31
SSU72P53538 CMC4YMR194C-B 222 nt0.63□□□□□ -2.31
SSU72P53538 NOP9YJL010C 2001 nt0.62□□□□□ -2.31
SSU72P53538 PAA1YDR071C 576 nt0.62□□□□□ -2.31
SSU72P53538 YGL149WYGL149W 306 nt0.62□□□□□ -2.31
SSU72P53538 INA22YIR024C 651 nt0.62□□□□□ -2.31
SSU72P53538 YPL044CYPL044C 549 nt0.62□□□□□ -2.31
SSU72P53538 snR60snR60 104 nt0.61□□□□□ -2.31
SSU72P53538 YFL032WYFL032W 321 nt0.61□□□□□ -2.31
SSU72P53538 YFL063WYFL063W 456 nt0.61□□□□□ -2.31
SSU72P53538 YIL032CYIL032C 357 nt0.61□□□□□ -2.31
SSU72P53538 SGF11YPL047W 300 nt0.61□□□□□ -2.31
SSU72P53538 COG8YML071C 1824 nt0.61□□□□□ -2.31
SSU72P53538 BFR2YDR299W 1605 nt0.6□□□□□ -2.31
SSU72P53538 VIK1YPL253C 1944 nt0.6□□□□□ -2.31
SSU72P53538 RPS27BYHR021C 249 nt0.6□□□□□ -2.31
SSU72P53538 YNL211CYNL211C 261 nt0.6□□□□□ -2.31
SSU72P53538 CSE2YNR010W 450 nt0.6□□□□□ -2.31
SSU72P53538 YOR218CYOR218C 420 nt0.6□□□□□ -2.31
SSU72P53538 SEC1YDR164C 2175 nt0.59□□□□□ -2.31
SSU72P53538 PMP1YCR024C-A 123 nt0.59□□□□□ -2.31
SSU72P53538 NHP2YDL208W 471 nt0.59□□□□□ -2.31
SSU72P53538 YDR413CYDR413C 576 nt0.59□□□□□ -2.31
SSU72P53538 YKL136WYKL136W 399 nt0.59□□□□□ -2.31
SSU72P53538 YMR193C-AYMR193C-A 387 nt0.59□□□□□ -2.31
SSU72P53538 RPL39YJL189W 156 nt0.58□□□□□ -2.32
SSU72P53538 YER097WYER097W 330 nt0.57□□□□□ -2.32
SSU72P53538 RPL26BYGR034W 384 nt0.57□□□□□ -2.32
SSU72P53538 RKR1YMR247C 4689 nt0.57□□□□□ -2.32
SSU72P53538 YDR524W-CYDR524W-C 90 nt0.56□□□□□ -2.32
SSU72P53538 STE5YDR103W 2754 nt0.56□□□□□ -2.32
SSU72P53538 ASE1YOR058C 2658 nt0.54□□□□□ -2.32
SSU72P53538 YFR012W-AYFR012W-A 87 nt0.54□□□□□ -2.32
SSU72P53538 YHR063W-AYHR063W-A 336 nt0.54□□□□□ -2.32
SSU72P53538 YIL142C-AYIL142C-A 333 nt0.54□□□□□ -2.32
SSU72P53538 YNL028WYNL028W 318 nt0.54□□□□□ -2.32
SSU72P53538 NPR2YEL062W 1848 nt0.54□□□□□ -2.32
SSU72P53538 YML002WYML002W 2214 nt0.53□□□□□ -2.32
SSU72P53538 YDR354C-AYDR354C-A 144 nt0.53□□□□□ -2.32
SSU72P53538 tT(AGU)BtT(AGU)B 73 nt0.53□□□□□ -2.32
SSU72P53538 tT(AGU)CtT(AGU)C 73 nt0.53□□□□□ -2.32
SSU72P53538 tT(AGU)DtT(AGU)D 73 nt0.53□□□□□ -2.32
SSU72P53538 tT(AGU)HtT(AGU)H 73 nt0.53□□□□□ -2.32
SSU72P53538 tT(AGU)I1tT(AGU)I1 73 nt0.53□□□□□ -2.32
SSU72P53538 tT(AGU)I2tT(AGU)I2 73 nt0.53□□□□□ -2.32
SSU72P53538 tT(AGU)JtT(AGU)J 73 nt0.53□□□□□ -2.32
SSU72P53538 tT(AGU)N1tT(AGU)N1 73 nt0.53□□□□□ -2.32
SSU72P53538 tT(AGU)N2tT(AGU)N2 73 nt0.53□□□□□ -2.32
SSU72P53538 tT(AGU)O1tT(AGU)O1 73 nt0.53□□□□□ -2.32
SSU72P53538 tT(AGU)O2tT(AGU)O2 73 nt0.53□□□□□ -2.32
SSU72P53538 YAL067W-AYAL067W-A 228 nt0.53□□□□□ -2.32
SSU72P53538 SEC8YPR055W 3198 nt0.52□□□□□ -2.33
SSU72P53538 CHS6YJL099W 2241 nt0.52□□□□□ -2.33
SSU72P53538 YCR018C-AYCR018C-A 255 nt0.51□□□□□ -2.33
SSU72P53538 UTP10YJL109C 5310 nt0.51□□□□□ -2.33
SSU72P53538 YMR307C-AYMR307C-A 195 nt0.5□□□□□ -2.33
SSU72P53538 YDL185C-AYDL185C-A 228 nt0.49□□□□□ -2.33
SSU72P53538 COX5BYIL111W 456 nt0.49□□□□□ -2.33
SSU72P53538 YJL026C-AYJL026C-A 222 nt0.49□□□□□ -2.33
SSU72P53538 YJL197C-AYJL197C-A 282 nt0.49□□□□□ -2.33
SSU72P53538 snR190snR190 190 nt0.49□□□□□ -2.33
SSU72P53538 YLR399W-AYLR399W-A 105 nt0.48□□□□□ -2.33
SSU72P53538 YPR160W-AYPR160W-A 81 nt0.48□□□□□ -2.33
SSU72P53538 RAD61YDR014W 1944 nt0.48□□□□□ -2.33
SSU72P53538 YEL020C-BYEL020C-B 198 nt0.47□□□□□ -2.33
SSU72P53538 FYV10YIL097W 1551 nt0.47□□□□□ -2.33
SSU72P53538 YLL019W-AYLL019W-A 93 nt0.46□□□□□ -2.34
SSU72P53538 YLR120W-AYLR120W-A 102 nt0.46□□□□□ -2.34
SSU72P53538 YOR015WYOR015W 360 nt0.46□□□□□ -2.34
SSU72P53538 YOR072W-BYOR072W-B 162 nt0.46□□□□□ -2.34
SSU72P53538 YMR160WYMR160W 2451 nt0.46□□□□□ -2.34
SSU72P53538 LTE1YAL024C 4308 nt0.45□□□□□ -2.34
SSU72P53538 YLR282CYLR282C 342 nt0.45□□□□□ -2.34
SSU72P53538 YOR008C-AYOR008C-A 225 nt0.45□□□□□ -2.34
SSU72P53538 COY1YKL179C 2040 nt0.45□□□□□ -2.34
SSU72P53538 HAL9YOL089C 3093 nt0.44□□□□□ -2.34
SSU72P53538 PRP5YBR237W 2550 nt0.44□□□□□ -2.34
SSU72P53538 YGR069WYGR069W 336 nt0.44□□□□□ -2.34
SSU72P53538 YJL127W-AYJL127W-A 117 nt0.44□□□□□ -2.34
SSU72P53538 YPR092WYPR092W 306 nt0.44□□□□□ -2.34
SSU72P53538 YSP1YHR155W 3687 nt0.43□□□□□ -2.34
SSU72P53538 YGL052WYGL052W 306 nt0.43□□□□□ -2.34
SSU72P53538 YMR172C-AYMR172C-A 384 nt0.43□□□□□ -2.34
SSU72P53538 OST4YDL232W 111 nt0.42□□□□□ -2.34
SSU72P53538 YGL123C-AYGL123C-A 231 nt0.42□□□□□ -2.34
SSU72P53538 Q0142Q0142 177 nt0.42□□□□□ -2.34
SSU72P53538 YNL277W-AYNL277W-A 189 nt0.42□□□□□ -2.34
SSU72P53538 PRP42YDR235W 1635 nt0.42□□□□□ -2.34
SSU72P53538 snR65snR65 100 nt0.41□□□□□ -2.34
SSU72P53538 YIL134C-AYIL134C-A 204 nt0.41□□□□□ -2.34
SSU72P53538 YKL100W-AYKL100W-A 90 nt0.41□□□□□ -2.34
SSU72P53538 STF2YGR008C 255 nt0.4□□□□□ -2.35
SSU72P53538 BLI1YKL061W 342 nt0.4□□□□□ -2.35
SSU72P53538 YNL146WYNL146W 303 nt0.4□□□□□ -2.35
SSU72P53538 YOR161W-AYOR161W-A 81 nt0.4□□□□□ -2.35
SSU72P53538 snR74snR74 88 nt0.39□□□□□ -2.35
SSU72P53538 ULI1YFR026C 510 nt0.39□□□□□ -2.35
SSU72P53538 tN(GUU)QtN(GUU)Q 71 nt0.39□□□□□ -2.35
SSU72P53538 BEM3YPL115C 3387 nt0.39□□□□□ -2.35
SSU72P53538 PET111YMR257C 2403 nt0.39□□□□□ -2.35
Retrieved 100 of 7,029 protein–RNA pairs in 83.6 ms