Protein–RNA interactions for Protein: P53367

ARFIP1, Arfaptin-1, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFIP1P53367 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ARFIP1P53367 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ARFIP1P53367 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
ARFIP1P53367 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.05■□□□□ 0.64
ARFIP1P53367 AC091874.3-201ENST00000512672 1195 ntBASIC19.05■□□□□ 0.64
ARFIP1P53367 AC090192.1-201ENST00000517740 490 ntBASIC19.05■□□□□ 0.64
ARFIP1P53367 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ARFIP1P53367 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ARFIP1P53367 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.05■□□□□ 0.64
ARFIP1P53367 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ARFIP1P53367 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.05■□□□□ 0.64
ARFIP1P53367 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.05■□□□□ 0.64
ARFIP1P53367 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.05■□□□□ 0.64
ARFIP1P53367 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.05■□□□□ 0.64
ARFIP1P53367 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ARFIP1P53367 KRT16P6-202ENST00000425692 1426 ntBASIC19.05■□□□□ 0.64
ARFIP1P53367 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ARFIP1P53367 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ARFIP1P53367 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
ARFIP1P53367 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
ARFIP1P53367 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
ARFIP1P53367 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ARFIP1P53367 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
ARFIP1P53367 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ARFIP1P53367 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ARFIP1P53367 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
ARFIP1P53367 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.04■□□□□ 0.64
ARFIP1P53367 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.04■□□□□ 0.64
ARFIP1P53367 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ARFIP1P53367 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.04■□□□□ 0.64
ARFIP1P53367 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.04■□□□□ 0.64
ARFIP1P53367 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.04■□□□□ 0.64
ARFIP1P53367 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.04■□□□□ 0.64
ARFIP1P53367 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.04■□□□□ 0.64
ARFIP1P53367 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ARFIP1P53367 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ARFIP1P53367 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ARFIP1P53367 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.04■□□□□ 0.64
ARFIP1P53367 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ARFIP1P53367 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.03■□□□□ 0.64
ARFIP1P53367 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
ARFIP1P53367 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
ARFIP1P53367 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ARFIP1P53367 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ARFIP1P53367 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.03■□□□□ 0.64
ARFIP1P53367 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.03■□□□□ 0.64
ARFIP1P53367 DUSP5P2-201ENST00000426873 1033 ntBASIC19.03■□□□□ 0.64
ARFIP1P53367 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.03■□□□□ 0.64
ARFIP1P53367 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.03■□□□□ 0.64
ARFIP1P53367 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
ARFIP1P53367 AC142086.2-201ENST00000569753 217 ntBASIC19.03■□□□□ 0.64
ARFIP1P53367 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.03■□□□□ 0.64
ARFIP1P53367 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
ARFIP1P53367 AL109923.1-201ENST00000618799 583 ntBASIC19.03■□□□□ 0.64
ARFIP1P53367 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ARFIP1P53367 MYC-209ENST00000641252 345 ntBASIC19.03■□□□□ 0.64
ARFIP1P53367 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
ARFIP1P53367 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.03■□□□□ 0.64
ARFIP1P53367 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ARFIP1P53367 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
ARFIP1P53367 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ARFIP1P53367 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.03■□□□□ 0.64
ARFIP1P53367 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.03■□□□□ 0.64
ARFIP1P53367 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.03■□□□□ 0.64
ARFIP1P53367 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.02■□□□□ 0.64
ARFIP1P53367 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.02■□□□□ 0.64
ARFIP1P53367 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ARFIP1P53367 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
ARFIP1P53367 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ARFIP1P53367 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ARFIP1P53367 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ARFIP1P53367 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ARFIP1P53367 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ARFIP1P53367 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ARFIP1P53367 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ARFIP1P53367 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.02■□□□□ 0.64
ARFIP1P53367 AC097658.1-201ENST00000475555 843 ntBASIC19.02■□□□□ 0.64
ARFIP1P53367 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ARFIP1P53367 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ARFIP1P53367 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.02■□□□□ 0.64
ARFIP1P53367 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ARFIP1P53367 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ARFIP1P53367 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.02■□□□□ 0.63
ARFIP1P53367 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
ARFIP1P53367 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
ARFIP1P53367 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ARFIP1P53367 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
ARFIP1P53367 TCF3P1-201ENST00000423021 1937 ntBASIC19.02■□□□□ 0.63
ARFIP1P53367 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ARFIP1P53367 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
ARFIP1P53367 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ARFIP1P53367 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ARFIP1P53367 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
ARFIP1P53367 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.01■□□□□ 0.63
ARFIP1P53367 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.01■□□□□ 0.63
ARFIP1P53367 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.01■□□□□ 0.63
ARFIP1P53367 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.01■□□□□ 0.63
ARFIP1P53367 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.01■□□□□ 0.63
ARFIP1P53367 AC133041.1-202ENST00000642053 222 ntBASIC19.01■□□□□ 0.63
ARFIP1P53367 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms