Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLCN4P51793 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLCN4P51793 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLCN4P51793 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLCN4P51793 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CLCN4P51793 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLCN4P51793 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLCN4P51793 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLCN4P51793 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CLCN4P51793 TMPOP1-202ENST00000424642 1267 ntBASIC21.16■□□□□ 0.98
CLCN4P51793 RBM17P1-201ENST00000453646 1190 ntBASIC21.16■□□□□ 0.98
CLCN4P51793 NUDT16P1-203ENST00000513809 620 ntBASIC21.16■□□□□ 0.98
CLCN4P51793 RN7SL850P-201ENST00000579959 291 ntBASIC21.16■□□□□ 0.98
CLCN4P51793 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.16■□□□□ 0.98
CLCN4P51793 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CLCN4P51793 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.16■□□□□ 0.98
CLCN4P51793 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLCN4P51793 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CLCN4P51793 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLCN4P51793 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLCN4P51793 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLCN4P51793 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLCN4P51793 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLCN4P51793 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CLCN4P51793 CLDN5-201ENST00000403084 2357 ntBASIC21.15■□□□□ 0.98
CLCN4P51793 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.15■□□□□ 0.98
CLCN4P51793 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.15■□□□□ 0.98
CLCN4P51793 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.15■□□□□ 0.98
CLCN4P51793 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.15■□□□□ 0.98
CLCN4P51793 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.15■□□□□ 0.98
CLCN4P51793 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.15■□□□□ 0.98
CLCN4P51793 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.15■□□□□ 0.98
CLCN4P51793 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.15■□□□□ 0.98
CLCN4P51793 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CLCN4P51793 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CLCN4P51793 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CLCN4P51793 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CLCN4P51793 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.15■□□□□ 0.98
CLCN4P51793 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CLCN4P51793 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CLCN4P51793 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CLCN4P51793 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.14■□□□□ 0.97
CLCN4P51793 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLCN4P51793 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLCN4P51793 AP002982.1-201ENST00000492365 877 ntBASIC21.14■□□□□ 0.97
CLCN4P51793 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.14■□□□□ 0.97
CLCN4P51793 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.14■□□□□ 0.97
CLCN4P51793 REXO1L10P-201ENST00000615707 1290 ntBASIC21.14■□□□□ 0.97
CLCN4P51793 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.14■□□□□ 0.97
CLCN4P51793 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.14■□□□□ 0.97
CLCN4P51793 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CLCN4P51793 PTBP1P-201ENST00000554374 1601 ntBASIC21.14■□□□□ 0.97
CLCN4P51793 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLCN4P51793 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CLCN4P51793 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CLCN4P51793 AC079598.2-202ENST00000546624 1451 ntBASIC21.13■□□□□ 0.97
CLCN4P51793 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLCN4P51793 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLCN4P51793 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLCN4P51793 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLCN4P51793 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLCN4P51793 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLCN4P51793 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLCN4P51793 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLCN4P51793 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLCN4P51793 HLA-G-202ENST00000376815 851 ntBASIC21.13■□□□□ 0.97
CLCN4P51793 HLA-G-203ENST00000376818 1127 ntBASIC21.13■□□□□ 0.97
CLCN4P51793 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLCN4P51793 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.13■□□□□ 0.97
CLCN4P51793 AC145285.6-201ENST00000604632 637 ntBASIC21.13■□□□□ 0.97
CLCN4P51793 MIR6786-201ENST00000616843 113 ntBASIC21.13■□□□□ 0.97
CLCN4P51793 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
CLCN4P51793 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLCN4P51793 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLCN4P51793 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.12■□□□□ 0.97
CLCN4P51793 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.12■□□□□ 0.97
CLCN4P51793 AC121338.2-201ENST00000622535 1744 ntBASIC21.12■□□□□ 0.97
CLCN4P51793 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLCN4P51793 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLCN4P51793 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CLCN4P51793 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLCN4P51793 UNC93B2-201ENST00000285383 730 ntBASIC21.12■□□□□ 0.97
CLCN4P51793 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLCN4P51793 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.12■□□□□ 0.97
CLCN4P51793 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLCN4P51793 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.12■□□□□ 0.97
CLCN4P51793 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLCN4P51793 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CLCN4P51793 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLCN4P51793 KRT8P9-201ENST00000558927 1449 ntBASIC21.12■□□□□ 0.97
CLCN4P51793 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CLCN4P51793 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.12■□□□□ 0.97
CLCN4P51793 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLCN4P51793 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.11■□□□□ 0.97
CLCN4P51793 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.11■□□□□ 0.97
CLCN4P51793 AL049796.1-201ENST00000565336 1766 ntBASIC21.11■□□□□ 0.97
CLCN4P51793 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
CLCN4P51793 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CLCN4P51793 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CLCN4P51793 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms