Protein–RNA interactions for Protein: P49686

NUP42, Nucleoporin NUP42, yeastyeast

Known RBP Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP42P49686 CDC25YLR310C 4770 nt2.42□□□□□ -2.02
NUP42P49686 snR14snR14 160 nt2.42□□□□□ -2.02
NUP42P49686 CYR1YJL005W 6081 nt2.42□□□□□ -2.02
NUP42P49686 WAR1YML076C 2835 nt2.41□□□□□ -2.02
NUP42P49686 STO1YMR125W 2586 nt2.41□□□□□ -2.02
NUP42P49686 TOM1YDR457W 9807 nt2.41□□□□□ -2.02
NUP42P49686 STT4YLR305C 5703 nt2.4□□□□□ -2.02
NUP42P49686 RGA1YOR127W 3024 nt2.4□□□□□ -2.02
NUP42P49686 YBL100W-CYBL100W-C 120 nt2.39□□□□□ -2.03
NUP42P49686 UBR2YLR024C 5619 nt2.39□□□□□ -2.03
NUP42P49686 NUP157YER105C 4176 nt2.38□□□□□ -2.03
NUP42P49686 CSF1YLR087C 8877 nt2.37□□□□□ -2.03
NUP42P49686 APL3YBL037W 3078 nt2.37□□□□□ -2.03
NUP42P49686 SET3YKR029C 2256 nt2.37□□□□□ -2.03
NUP42P49686 BPT1YLL015W 4680 nt2.37□□□□□ -2.03
NUP42P49686 KAP122YGL016W 3246 nt2.36□□□□□ -2.03
NUP42P49686 CIN8YEL061C 3003 nt2.36□□□□□ -2.03
NUP42P49686 YHR180W-AYHR180W-A 183 nt2.36□□□□□ -2.03
NUP42P49686 YBR196C-AYBR196C-A 150 nt2.35□□□□□ -2.03
NUP42P49686 YGR027W-BYGR027W-B 5268 nt2.35□□□□□ -2.03
NUP42P49686 YLR227W-BYLR227W-B 5268 nt2.35□□□□□ -2.03
NUP42P49686 YPR158C-DYPR158C-D 5268 nt2.35□□□□□ -2.03
NUP42P49686 BEM3YPL115C 3387 nt2.34□□□□□ -2.03
NUP42P49686 KCS1YDR017C 3153 nt2.34□□□□□ -2.03
NUP42P49686 STH1YIL126W 4080 nt2.34□□□□□ -2.04
NUP42P49686 SPO14YKR031C 5052 nt2.34□□□□□ -2.04
NUP42P49686 PMR1YGL167C 2853 nt2.33□□□□□ -2.04
NUP42P49686 DYN1YKR054C 12279 nt2.33□□□□□ -2.04
NUP42P49686 DBP10YDL031W 2988 nt2.32□□□□□ -2.04
NUP42P49686 AXL1YPR122W 3627 nt2.32□□□□□ -2.04
NUP42P49686 YBL071C-BYBL071C-B 99 nt2.32□□□□□ -2.04
NUP42P49686 BNI1YNL271C 5862 nt2.31□□□□□ -2.04
NUP42P49686 YGL063C-AYGL063C-A 150 nt2.31□□□□□ -2.04
NUP42P49686 YDR034C-AYDR034C-A 177 nt2.3□□□□□ -2.04
NUP42P49686 GEA2YEL022W 4380 nt2.3□□□□□ -2.04
NUP42P49686 YMR122W-AYMR122W-A 255 nt2.28□□□□□ -2.04
NUP42P49686 PRP16YKR086W 3216 nt2.28□□□□□ -2.04
NUP42P49686 SEC8YPR055W 3198 nt2.27□□□□□ -2.05
NUP42P49686 tQ(UUG)BtQ(UUG)B 72 nt2.27□□□□□ -2.05
NUP42P49686 YBR200W-AYBR200W-A 165 nt2.27□□□□□ -2.05
NUP42P49686 ECM29YHL030W 5607 nt2.26□□□□□ -2.05
NUP42P49686 TMA7YLR262C-A 195 nt2.26□□□□□ -2.05
NUP42P49686 IRA2YOL081W 9240 nt2.25□□□□□ -2.05
NUP42P49686 PDR11YIL013C 4236 nt2.25□□□□□ -2.05
NUP42P49686 YDL073WYDL073W 2955 nt2.25□□□□□ -2.05
NUP42P49686 SWI4YER111C 3282 nt2.24□□□□□ -2.05
NUP42P49686 PAU10YDR542W 363 nt2.24□□□□□ -2.05
NUP42P49686 tK(UUU)DtK(UUU)D 73 nt2.24□□□□□ -2.05
NUP42P49686 tK(UUU)G1tK(UUU)G1 73 nt2.24□□□□□ -2.05
NUP42P49686 tK(UUU)G2tK(UUU)G2 73 nt2.24□□□□□ -2.05
NUP42P49686 tK(UUU)KtK(UUU)K 73 nt2.24□□□□□ -2.05
NUP42P49686 tK(UUU)LtK(UUU)L 73 nt2.24□□□□□ -2.05
NUP42P49686 tK(UUU)OtK(UUU)O 73 nt2.24□□□□□ -2.05
NUP42P49686 tK(UUU)PtK(UUU)P 73 nt2.24□□□□□ -2.05
NUP42P49686 PAU4YLR461W 363 nt2.24□□□□□ -2.05
NUP42P49686 YOL019W-AYOL019W-A 153 nt2.24□□□□□ -2.05
NUP42P49686 NUP145YGL092W 3954 nt2.24□□□□□ -2.05
NUP42P49686 UTP22YGR090W 3714 nt2.24□□□□□ -2.05
NUP42P49686 UBP2YOR124C 3819 nt2.23□□□□□ -2.05
NUP42P49686 YPL216WYPL216W 3309 nt2.23□□□□□ -2.05
NUP42P49686 BPH1YCR032W 6504 nt2.23□□□□□ -2.05
NUP42P49686 USO1YDL058W 5373 nt2.23□□□□□ -2.05
NUP42P49686 ASE1YOR058C 2658 nt2.22□□□□□ -2.05
NUP42P49686 YOR296WYOR296W 3870 nt2.22□□□□□ -2.05
NUP42P49686 RPS26AYGL189C 360 nt2.22□□□□□ -2.05
NUP42P49686 YOL164W-AYOL164W-A 183 nt2.22□□□□□ -2.05
NUP42P49686 RPA190YOR341W 4995 nt2.21□□□□□ -2.05
NUP42P49686 SEC3YER008C 4011 nt2.21□□□□□ -2.06
NUP42P49686 YGR240C-AYGR240C-A 201 nt2.21□□□□□ -2.06
NUP42P49686 SEC10YLR166C 2616 nt2.21□□□□□ -2.06
NUP42P49686 YLR399W-AYLR399W-A 105 nt2.19□□□□□ -2.06
NUP42P49686 BCK1YJL095W 4437 nt2.19□□□□□ -2.06
NUP42P49686 MSN5YDR335W 3675 nt2.19□□□□□ -2.06
NUP42P49686 UBP3YER151C 2739 nt2.19□□□□□ -2.06
NUP42P49686 DNA2YHR164C 4569 nt2.18□□□□□ -2.06
NUP42P49686 YSP1YHR155W 3687 nt2.16□□□□□ -2.06
NUP42P49686 SEC16YPL085W 6588 nt2.15□□□□□ -2.07
NUP42P49686 YLR419WYLR419W 4308 nt2.15□□□□□ -2.07
NUP42P49686 tC(GCA)BtC(GCA)B 72 nt2.14□□□□□ -2.07
NUP42P49686 tC(GCA)GtC(GCA)G 72 nt2.14□□□□□ -2.07
NUP42P49686 tC(GCA)P1tC(GCA)P1 72 nt2.14□□□□□ -2.07
NUP42P49686 tC(GCA)P2tC(GCA)P2 72 nt2.14□□□□□ -2.07
NUP42P49686 TOR2YKL203C 7425 nt2.14□□□□□ -2.07
NUP42P49686 BST1YFL025C 3090 nt2.14□□□□□ -2.07
NUP42P49686 RGC1YPR115W 3252 nt2.13□□□□□ -2.07
NUP42P49686 CLU1YMR012W 3834 nt2.13□□□□□ -2.07
NUP42P49686 YIL082W-AYIL082W-A 4497 nt2.12□□□□□ -2.07
NUP42P49686 tF(GAA)DtF(GAA)D 73 nt2.12□□□□□ -2.07
NUP42P49686 tF(GAA)NtF(GAA)N 73 nt2.12□□□□□ -2.07
NUP42P49686 TRA1YHR099W 11235 nt2.12□□□□□ -2.07
NUP42P49686 GLG1YKR058W 1851 nt2.11□□□□□ -2.07
NUP42P49686 SAC3YDR159W 3906 nt2.11□□□□□ -2.07
NUP42P49686 VPS13YLL040C 9435 nt2.11□□□□□ -2.07
NUP42P49686 AZF1YOR113W 2745 nt2.11□□□□□ -2.07
NUP42P49686 YMR045CYMR045C 5268 nt2.1□□□□□ -2.07
NUP42P49686 MON2YNL297C 4911 nt2.09□□□□□ -2.07
NUP42P49686 YLR286W-AYLR286W-A 135 nt2.09□□□□□ -2.07
NUP42P49686 YPR160W-AYPR160W-A 81 nt2.09□□□□□ -2.07
NUP42P49686 PKH3YDR466W 2697 nt2.09□□□□□ -2.08
NUP42P49686 NNF2YGR089W 2811 nt2.09□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 14.5 ms