Protein–RNA interactions for Protein: P47171

HIR3, Histone transcription regulator 3, yeastyeast

Predictions only

Length 1,648 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HIR3P47171 SDH7YDR511W 402 nt-2.53□□□□□ -2.82
HIR3P47171 RUF20RUF20 443 nt-2.55□□□□□ -2.82
HIR3P47171 YIR044CYIR044C 186 nt-2.56□□□□□ -2.82
HIR3P47171 BER1YLR412W 825 nt-2.56□□□□□ -2.82
HIR3P47171 YCR018C-AYCR018C-A 255 nt-2.57□□□□□ -2.82
HIR3P47171 YDL185C-AYDL185C-A 228 nt-2.57□□□□□ -2.82
HIR3P47171 YOR366WYOR366W 354 nt-2.57□□□□□ -2.82
HIR3P47171 RDS3YPR094W 324 nt-2.57□□□□□ -2.82
HIR3P47171 CBS1YDL069C 690 nt-2.6□□□□□ -2.83
HIR3P47171 LOC1YFR001W 615 nt-2.6□□□□□ -2.83
HIR3P47171 YER135CYER135C 393 nt-2.6□□□□□ -2.83
HIR3P47171 RSM18YER050C 417 nt-2.61□□□□□ -2.83
HIR3P47171 YDR269CYDR269C 324 nt-2.62□□□□□ -2.83
HIR3P47171 YJL086CYJL086C 369 nt-2.63□□□□□ -2.83
HIR3P47171 HUR1YGL168W 333 nt-2.64□□□□□ -2.83
HIR3P47171 SCEIQ0160 708 nt-2.64□□□□□ -2.83
HIR3P47171 YOR170WYOR170W 306 nt-2.66□□□□□ -2.84
HIR3P47171 snR81snR81 201 nt-2.67□□□□□ -2.84
HIR3P47171 YPL261CYPL261C 309 nt-2.68□□□□□ -2.84
HIR3P47171 YPR010C-AYPR010C-A 219 nt-2.68□□□□□ -2.84
HIR3P47171 snR74snR74 88 nt-2.69□□□□□ -2.84
HIR3P47171 YLR264C-AYLR264C-A 117 nt-2.69□□□□□ -2.84
HIR3P47171 YPR016W-AYPR016W-A 261 nt-2.69□□□□□ -2.84
HIR3P47171 YGR228WYGR228W 345 nt-2.7□□□□□ -2.84
HIR3P47171 YBR072C-AYBR072C-A 162 nt-2.7□□□□□ -2.84
HIR3P47171 ACF4YJR083C 930 nt-2.71□□□□□ -2.84
HIR3P47171 YJR140W-AYJR140W-A 150 nt-2.71□□□□□ -2.84
HIR3P47171 YGL052WYGL052W 306 nt-2.71□□□□□ -2.84
HIR3P47171 SPC24YMR117C 642 nt-2.71□□□□□ -2.84
HIR3P47171 SRB7YDR308C 423 nt-2.72□□□□□ -2.85
HIR3P47171 CUP1-1YHR053C 186 nt-2.72□□□□□ -2.85
HIR3P47171 CUP1-2YHR055C 186 nt-2.72□□□□□ -2.85
HIR3P47171 RPL22BYFL034C-A 369 nt-2.73□□□□□ -2.85
HIR3P47171 YPR092WYPR092W 306 nt-2.73□□□□□ -2.85
HIR3P47171 snR5snR5 204 nt-2.75□□□□□ -2.85
HIR3P47171 YOR011W-AYOR011W-A 207 nt-2.75□□□□□ -2.85
HIR3P47171 YOR192C-CYOR192C-C 237 nt-2.75□□□□□ -2.85
HIR3P47171 CDC65tQ(CUG)M 72 nt-2.77□□□□□ -2.85
HIR3P47171 YDR290WYDR290W 330 nt-2.78□□□□□ -2.85
HIR3P47171 EAF6YJR082C 342 nt-2.79□□□□□ -2.86
HIR3P47171 PET20YPL159C 762 nt-2.79□□□□□ -2.86
HIR3P47171 THG1YGR024C 714 nt-2.8□□□□□ -2.86
HIR3P47171 tT(UGU)Q1tT(UGU)Q1 76 nt-2.8□□□□□ -2.86
HIR3P47171 YNL162W-AYNL162W-A 219 nt-2.8□□□□□ -2.86
HIR3P47171 YOR293C-AYOR293C-A 150 nt-2.81□□□□□ -2.86
HIR3P47171 IRC16YPR038W 360 nt-2.84□□□□□ -2.86
HIR3P47171 COX7YMR256C 183 nt-2.85□□□□□ -2.87
HIR3P47171 DFG10YIL049W 762 nt-2.88□□□□□ -2.87
HIR3P47171 YDR366CYDR366C 399 nt-2.89□□□□□ -2.87
HIR3P47171 YGL015CYGL015C 393 nt-2.89□□□□□ -2.87
HIR3P47171 YMR304C-AYMR304C-A 351 nt-2.89□□□□□ -2.87
HIR3P47171 snR24snR24 89 nt-2.9□□□□□ -2.87
HIR3P47171 YBL107W-AYBL107W-A 105 nt-2.9□□□□□ -2.87
HIR3P47171 SGF11YPL047W 300 nt-2.93□□□□□ -2.88
HIR3P47171 YPL229WYPL229W 621 nt-2.93□□□□□ -2.88
HIR3P47171 snR77snR77 88 nt-2.93□□□□□ -2.88
HIR3P47171 YBR285WYBR285W 435 nt-2.94□□□□□ -2.88
HIR3P47171 YKL063CYKL063C 504 nt-2.95□□□□□ -2.88
HIR3P47171 YKL044WYKL044W 321 nt-2.96□□□□□ -2.88
HIR3P47171 YKL202WYKL202W 582 nt-2.96□□□□□ -2.88
HIR3P47171 YGL239CYGL239C 315 nt-2.97□□□□□ -2.88
HIR3P47171 AIM29YKR074W 468 nt-2.97□□□□□ -2.88
HIR3P47171 YHR125WYHR125W 306 nt-2.97□□□□□ -2.89
HIR3P47171 VPS63YLR261C 327 nt-2.97□□□□□ -2.89
HIR3P47171 CWC23YGL128C 852 nt-2.98□□□□□ -2.89
HIR3P47171 YER053C-AYER053C-A 114 nt-3□□□□□ -2.89
HIR3P47171 JLP2YMR132C 627 nt-3□□□□□ -2.89
HIR3P47171 snR72snR72 98 nt-3.01□□□□□ -2.89
HIR3P47171 YNL058CYNL058C 951 nt-3.01□□□□□ -2.89
HIR3P47171 YOL106WYOL106W 354 nt-3.01□□□□□ -2.89
HIR3P47171 BNS1YGR230W 414 nt-3.01□□□□□ -2.89
HIR3P47171 SDH6YDR379C-A 240 nt-3.04□□□□□ -2.9
HIR3P47171 snR39BsnR39B 96 nt-3.04□□□□□ -2.9
HIR3P47171 snR51snR51 107 nt-3.04□□□□□ -2.9
HIR3P47171 YGR240C-AYGR240C-A 201 nt-3.05□□□□□ -2.9
HIR3P47171 LSM4YER112W 564 nt-3.07□□□□□ -2.9
HIR3P47171 YNL205CYNL205C 423 nt-3.08□□□□□ -2.9
HIR3P47171 YER188C-AYER188C-A 300 nt-3.09□□□□□ -2.9
HIR3P47171 YOR121CYOR121C 306 nt-3.1□□□□□ -2.91
HIR3P47171 MND1YGL183C 660 nt-3.11□□□□□ -2.91
HIR3P47171 HMLALPHA2YCL067C 633 nt-3.11□□□□□ -2.91
HIR3P47171 MATALPHA2YCR039C 633 nt-3.11□□□□□ -2.91
HIR3P47171 HMRA2YCR096C 360 nt-3.11□□□□□ -2.91
HIR3P47171 POP7YBR167C 423 nt-3.12□□□□□ -2.91
HIR3P47171 YPT6YLR262C 648 nt-3.13□□□□□ -2.91
HIR3P47171 snR59snR59 78 nt-3.15□□□□□ -2.91
HIR3P47171 YFR009W-AYFR009W-A 258 nt-3.15□□□□□ -2.91
HIR3P47171 YIR021W-AYIR021W-A 213 nt-3.16□□□□□ -2.92
HIR3P47171 YMR315W-AYMR315W-A 108 nt-3.18□□□□□ -2.92
HIR3P47171 ILM1YJR118C 612 nt-3.21□□□□□ -2.92
HIR3P47171 YGR025WYGR025W 303 nt-3.22□□□□□ -2.92
HIR3P47171 RPS27BYHR021C 249 nt-3.22□□□□□ -2.92
HIR3P47171 ZEO1YOL109W 342 nt-3.22□□□□□ -2.92
HIR3P47171 YKL100W-AYKL100W-A 90 nt-3.23□□□□□ -2.93
HIR3P47171 CSE2YNR010W 450 nt-3.24□□□□□ -2.93
HIR3P47171 YLR202CYLR202C 327 nt-3.25□□□□□ -2.93
HIR3P47171 RPS30AYLR287C-A 192 nt-3.26□□□□□ -2.93
HIR3P47171 YMR193C-AYMR193C-A 387 nt-3.27□□□□□ -2.93
HIR3P47171 FYV7YLR068W 456 nt-3.29□□□□□ -2.94
HIR3P47171 BI2Q0110 1272 nt-3.3□□□□□ -2.94
Retrieved 100 of 7,029 protein–RNA pairs in 47.3 ms