Protein–RNA interactions for Protein: P45978

SCD6, Protein SCD6, yeastyeast

Known RBP RIP-Chip data

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SCD6P45978 tF(GAA)QtF(GAA)Q 75 nt1.26□□□□□ -2.21
SCD6P45978 YNL284C-BYNL284C-B 5268 nt1.26□□□□□ -2.21
SCD6P45978 NUP145YGL092W 3954 nt1.25□□□□□ -2.21
SCD6P45978 SWI4YER111C 3282 nt1.25□□□□□ -2.21 RIP-Chip
SCD6P45978 EAF1YDR359C 2949 nt1.25□□□□□ -2.21 RIP-Chip
SCD6P45978 MDS3YGL197W 4464 nt1.25□□□□□ -2.21 RIP-Chip
SCD6P45978 CDC36YDL165W 576 nt1.25□□□□□ -2.21
SCD6P45978 SET3YKR029C 2256 nt1.24□□□□□ -2.21
SCD6P45978 AHC1YOR023C 1701 nt1.24□□□□□ -2.21
SCD6P45978 YAR009CYAR009C 3591 nt1.24□□□□□ -2.21
SCD6P45978 snR74snR74 88 nt1.24□□□□□ -2.21
SCD6P45978 SGF11YPL047W 300 nt1.24□□□□□ -2.21
SCD6P45978 STO1YMR125W 2586 nt1.24□□□□□ -2.21
SCD6P45978 FYV8YGR196C 2454 nt1.24□□□□□ -2.21 RIP-Chip
SCD6P45978 NUP188YML103C 4968 nt1.23□□□□□ -2.21 RIP-Chip
SCD6P45978 ECM12YHR021W-A 456 nt1.23□□□□□ -2.21
SCD6P45978 YOR072W-BYOR072W-B 162 nt1.23□□□□□ -2.21
SCD6P45978 YBR221W-AYBR221W-A 105 nt1.23□□□□□ -2.21
SCD6P45978 NPR2YEL062W 1848 nt1.23□□□□□ -2.21
SCD6P45978 SPG3YDR504C 384 nt1.22□□□□□ -2.21
SCD6P45978 RRT15YLR162W-A 189 nt1.22□□□□□ -2.21
SCD6P45978 APL3YBL037W 3078 nt1.22□□□□□ -2.21
SCD6P45978 MSN5YDR335W 3675 nt1.22□□□□□ -2.21
SCD6P45978 YIR030W-AYIR030W-A 384 nt1.2□□□□□ -2.22
SCD6P45978 RSM22YKL155C 1887 nt1.2□□□□□ -2.22
SCD6P45978 YLL019W-AYLL019W-A 93 nt1.19□□□□□ -2.22
SCD6P45978 SPT7YBR081C 3999 nt1.19□□□□□ -2.22
SCD6P45978 YBR182C-AYBR182C-A 195 nt1.19□□□□□ -2.22
SCD6P45978 YKU70YMR284W 1809 nt1.18□□□□□ -2.22 RIP-Chip
SCD6P45978 YLL020CYLL020C 306 nt1.18□□□□□ -2.22
SCD6P45978 YBR200W-AYBR200W-A 165 nt1.18□□□□□ -2.22
SCD6P45978 WAR1YML076C 2835 nt1.17□□□□□ -2.22 RIP-Chip
SCD6P45978 YDR354C-AYDR354C-A 144 nt1.17□□□□□ -2.22
SCD6P45978 JLP2YMR132C 627 nt1.17□□□□□ -2.22 RIP-Chip
SCD6P45978 YOR302WYOR302W 78 nt1.17□□□□□ -2.22
SCD6P45978 CLU1YMR012W 3834 nt1.17□□□□□ -2.22
SCD6P45978 OLI1Q0130 231 nt1.16□□□□□ -2.22
SCD6P45978 BLI1YKL061W 342 nt1.15□□□□□ -2.23 RIP-Chip
SCD6P45978 GEA2YEL022W 4380 nt1.15□□□□□ -2.23 RIP-Chip
SCD6P45978 YDL196WYDL196W 330 nt1.14□□□□□ -2.23
SCD6P45978 tM(CAU)Q1tM(CAU)Q1 76 nt1.14□□□□□ -2.23
SCD6P45978 SEC3YER008C 4011 nt1.14□□□□□ -2.23 RIP-Chip
SCD6P45978 RAD9YDR217C 3930 nt1.13□□□□□ -2.23 RIP-Chip
SCD6P45978 ISD11YER048W-A 285 nt1.13□□□□□ -2.23
SCD6P45978 YMR046W-AYMR046W-A 129 nt1.13□□□□□ -2.23
SCD6P45978 APL1YJR005W 2103 nt1.13□□□□□ -2.23
SCD6P45978 QCR9YGR183C 201 nt1.12□□□□□ -2.23
SCD6P45978 APQ12YIL040W 417 nt1.12□□□□□ -2.23
SCD6P45978 YJL026C-AYJL026C-A 222 nt1.12□□□□□ -2.23
SCD6P45978 YNL211CYNL211C 261 nt1.12□□□□□ -2.23
SCD6P45978 STB6YKL072W 2301 nt1.11□□□□□ -2.23
SCD6P45978 YIL020C-AYIL020C-A 339 nt1.11□□□□□ -2.23
SCD6P45978 CMC4YMR194C-B 222 nt1.11□□□□□ -2.23
SCD6P45978 CDC39YCR093W 6327 nt1.11□□□□□ -2.23
SCD6P45978 ROM2YLR371W 4071 nt1.1□□□□□ -2.23
SCD6P45978 ULI1YFR026C 510 nt1.1□□□□□ -2.23
SCD6P45978 YAL067W-AYAL067W-A 228 nt1.1□□□□□ -2.23
SCD6P45978 NUP157YER105C 4176 nt1.1□□□□□ -2.23
SCD6P45978 PAA1YDR071C 576 nt1.09□□□□□ -2.23 RIP-Chip
SCD6P45978 YDR406W-AYDR406W-A 246 nt1.09□□□□□ -2.23
SCD6P45978 NOP9YJL010C 2001 nt1.09□□□□□ -2.24 RIP-Chip
SCD6P45978 DOP1YDR141C 5097 nt1.08□□□□□ -2.24 RIP-Chip
SCD6P45978 YBR131C-AYBR131C-A 90 nt1.08□□□□□ -2.24
SCD6P45978 YOR345CYOR345C 351 nt1.07□□□□□ -2.24
SCD6P45978 PAM16YJL104W 450 nt1.06□□□□□ -2.24
SCD6P45978 YPL044CYPL044C 549 nt1.06□□□□□ -2.24
SCD6P45978 NST1YNL091W 3723 nt1.05□□□□□ -2.24 RIP-Chip
SCD6P45978 YDL185C-AYDL185C-A 228 nt1.04□□□□□ -2.24
SCD6P45978 YEL014CYEL014C 306 nt1.04□□□□□ -2.24
SCD6P45978 RPS30BYOR182C 192 nt1.04□□□□□ -2.24
SCD6P45978 YNL097C-BYNL097C-B 123 nt1.03□□□□□ -2.24
SCD6P45978 YCR018C-AYCR018C-A 255 nt1.02□□□□□ -2.25
SCD6P45978 RPL26BYGR034W 384 nt1.02□□□□□ -2.25
SCD6P45978 COX12YLR038C 252 nt1.02□□□□□ -2.25
SCD6P45978 tF(GAA)BtF(GAA)B 73 nt1.01□□□□□ -2.25
SCD6P45978 tF(GAA)FtF(GAA)F 73 nt1.01□□□□□ -2.25
SCD6P45978 tF(GAA)GtF(GAA)G 73 nt1.01□□□□□ -2.25
SCD6P45978 tF(GAA)H1tF(GAA)H1 73 nt1.01□□□□□ -2.25
SCD6P45978 tF(GAA)H2tF(GAA)H2 73 nt1.01□□□□□ -2.25
SCD6P45978 tF(GAA)MtF(GAA)M 73 nt1.01□□□□□ -2.25
SCD6P45978 tF(GAA)P1tF(GAA)P1 73 nt1.01□□□□□ -2.25
SCD6P45978 tF(GAA)P2tF(GAA)P2 73 nt1.01□□□□□ -2.25
SCD6P45978 YFR012W-AYFR012W-A 87 nt1.01□□□□□ -2.25
SCD6P45978 COY1YKL179C 2040 nt1.01□□□□□ -2.25 RIP-Chip
SCD6P45978 YJR029WYJR029W 5268 nt1□□□□□ -2.25
SCD6P45978 YPR137C-BYPR137C-B 5268 nt1□□□□□ -2.25
SCD6P45978 TAH1YCR060W 336 nt1□□□□□ -2.25
SCD6P45978 YGL123C-AYGL123C-A 231 nt1□□□□□ -2.25
SCD6P45978 YIL134C-AYIL134C-A 204 nt1□□□□□ -2.25
SCD6P45978 KAP120YPL125W 3099 nt1□□□□□ -2.25
SCD6P45978 HAL9YOL089C 3093 nt0.99□□□□□ -2.25
SCD6P45978 ASE1YOR058C 2658 nt0.98□□□□□ -2.25
SCD6P45978 YCR038W-AYCR038W-A 126 nt0.98□□□□□ -2.25
SCD6P45978 YLR282CYLR282C 342 nt0.98□□□□□ -2.25
SCD6P45978 UBP3YER151C 2739 nt0.97□□□□□ -2.25 RIP-Chip
SCD6P45978 YKL100W-AYKL100W-A 90 nt0.97□□□□□ -2.25
SCD6P45978 YOR161W-AYOR161W-A 81 nt0.97□□□□□ -2.25
SCD6P45978 YNL337WYNL337W 255 nt0.96□□□□□ -2.26
SCD6P45978 snR190snR190 190 nt0.96□□□□□ -2.26
SCD6P45978 EMT1tM(CAU)D 73 nt0.95□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 15.1 ms