Protein–RNA interactions for Protein: P38828

LSM12, Protein LSM12, yeastyeast

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM12P38828 RPS27BYHR021C 249 nt0.89□□□□□ -2.27
LSM12P38828 YMR031W-AYMR031W-A 327 nt0.89□□□□□ -2.27
LSM12P38828 CSE2YNR010W 450 nt0.89□□□□□ -2.27
LSM12P38828 RAD61YDR014W 1944 nt0.88□□□□□ -2.27
LSM12P38828 YDL196WYDL196W 330 nt0.88□□□□□ -2.27
LSM12P38828 YMR321CYMR321C 318 nt0.88□□□□□ -2.27
LSM12P38828 SEC3YER008C 4011 nt0.87□□□□□ -2.27
LSM12P38828 YFR012W-AYFR012W-A 87 nt0.87□□□□□ -2.27
LSM12P38828 YNL146WYNL146W 303 nt0.87□□□□□ -2.27
LSM12P38828 YNL211CYNL211C 261 nt0.87□□□□□ -2.27
LSM12P38828 MYO1YHR023W 5787 nt0.87□□□□□ -2.27
LSM12P38828 ROM2YLR371W 4071 nt0.87□□□□□ -2.27
LSM12P38828 YGR069WYGR069W 336 nt0.86□□□□□ -2.27
LSM12P38828 YOR218CYOR218C 420 nt0.86□□□□□ -2.27
LSM12P38828 BFR2YDR299W 1605 nt0.86□□□□□ -2.27
LSM12P38828 YDR354C-AYDR354C-A 144 nt0.85□□□□□ -2.27
LSM12P38828 CMC4YMR194C-B 222 nt0.85□□□□□ -2.27
LSM12P38828 YNL028WYNL028W 318 nt0.85□□□□□ -2.27
LSM12P38828 YNL277W-AYNL277W-A 189 nt0.85□□□□□ -2.27
LSM12P38828 IES4YOR189W 351 nt0.85□□□□□ -2.27
LSM12P38828 YGR130CYGR130C 2451 nt0.83□□□□□ -2.28
LSM12P38828 YLR120W-AYLR120W-A 102 nt0.83□□□□□ -2.28
LSM12P38828 ASE1YOR058C 2658 nt0.83□□□□□ -2.28
LSM12P38828 NOP9YJL010C 2001 nt0.82□□□□□ -2.28
LSM12P38828 IML1YJR138W 4755 nt0.82□□□□□ -2.28
LSM12P38828 snR65snR65 100 nt0.81□□□□□ -2.28
LSM12P38828 YDL185C-AYDL185C-A 228 nt0.81□□□□□ -2.28
LSM12P38828 YOR231C-AYOR231C-A 201 nt0.81□□□□□ -2.28
LSM12P38828 YPR117WYPR117W 7470 nt0.81□□□□□ -2.28
LSM12P38828 YEL020C-BYEL020C-B 198 nt0.8□□□□□ -2.28
LSM12P38828 YPL044CYPL044C 549 nt0.8□□□□□ -2.28
LSM12P38828 KAP120YPL125W 3099 nt0.79□□□□□ -2.28
LSM12P38828 TTI1YKL033W 3117 nt0.79□□□□□ -2.28
LSM12P38828 snR74snR74 88 nt0.79□□□□□ -2.28
LSM12P38828 ISD11YER048W-A 285 nt0.79□□□□□ -2.28
LSM12P38828 YGL052WYGL052W 306 nt0.78□□□□□ -2.28
LSM12P38828 YJL197C-AYJL197C-A 282 nt0.78□□□□□ -2.28
LSM12P38828 YLL019W-AYLL019W-A 93 nt0.78□□□□□ -2.28
LSM12P38828 YMR172C-AYMR172C-A 384 nt0.78□□□□□ -2.28
LSM12P38828 ANS1YHR126C 480 nt0.77□□□□□ -2.29
LSM12P38828 YJL026C-AYJL026C-A 222 nt0.77□□□□□ -2.29
LSM12P38828 YPR092WYPR092W 306 nt0.77□□□□□ -2.29
LSM12P38828 YDL073WYDL073W 2955 nt0.76□□□□□ -2.29
LSM12P38828 PMP1YCR024C-A 123 nt0.76□□□□□ -2.29
LSM12P38828 PAU24YBR301W 363 nt0.76□□□□□ -2.29
LSM12P38828 PAA1YDR071C 576 nt0.75□□□□□ -2.29
LSM12P38828 YAL067W-AYAL067W-A 228 nt0.75□□□□□ -2.29
LSM12P38828 YOR282WYOR282W 321 nt0.75□□□□□ -2.29
LSM12P38828 YOR008C-AYOR008C-A 225 nt0.74□□□□□ -2.29
LSM12P38828 YCR018C-AYCR018C-A 255 nt0.72□□□□□ -2.29
LSM12P38828 RPL26BYGR034W 384 nt0.72□□□□□ -2.29
LSM12P38828 YPL152W-AYPL152W-A 99 nt0.72□□□□□ -2.29
LSM12P38828 COY1YKL179C 2040 nt0.71□□□□□ -2.3
LSM12P38828 YER181CYER181C 324 nt0.7□□□□□ -2.3
LSM12P38828 YOR072W-BYOR072W-B 162 nt0.7□□□□□ -2.3
LSM12P38828 CHS6YJL099W 2241 nt0.7□□□□□ -2.3
LSM12P38828 NPR2YEL062W 1848 nt0.7□□□□□ -2.3
LSM12P38828 YGL041CYGL041C 204 nt0.69□□□□□ -2.3
LSM12P38828 YOR161W-AYOR161W-A 81 nt0.69□□□□□ -2.3
LSM12P38828 snR190snR190 190 nt0.69□□□□□ -2.3
LSM12P38828 SEC1YDR164C 2175 nt0.67□□□□□ -2.3
LSM12P38828 YHR063W-AYHR063W-A 336 nt0.67□□□□□ -2.3
LSM12P38828 LTE1YAL024C 4308 nt0.66□□□□□ -2.3
LSM12P38828 YLR282CYLR282C 342 nt0.66□□□□□ -2.3
LSM12P38828 YMR272W-AYMR272W-A 114 nt0.66□□□□□ -2.3
LSM12P38828 RPS30BYOR182C 192 nt0.66□□□□□ -2.3
LSM12P38828 snR49snR49 165 nt0.66□□□□□ -2.3
LSM12P38828 YML002WYML002W 2214 nt0.66□□□□□ -2.3
LSM12P38828 tF(GAA)QtF(GAA)Q 75 nt0.65□□□□□ -2.31
LSM12P38828 YMR307C-AYMR307C-A 195 nt0.65□□□□□ -2.31
LSM12P38828 YPR160W-AYPR160W-A 81 nt0.65□□□□□ -2.31
LSM12P38828 ULI1YFR026C 510 nt0.64□□□□□ -2.31
LSM12P38828 tN(GUU)QtN(GUU)Q 71 nt0.64□□□□□ -2.31
LSM12P38828 YIL134C-AYIL134C-A 204 nt0.64□□□□□ -2.31
LSM12P38828 PRP5YBR237W 2550 nt0.64□□□□□ -2.31
LSM12P38828 PRP16YKR086W 3216 nt0.63□□□□□ -2.31
LSM12P38828 FYV10YIL097W 1551 nt0.63□□□□□ -2.31
LSM12P38828 YGL123C-AYGL123C-A 231 nt0.63□□□□□ -2.31
LSM12P38828 YIR030W-AYIR030W-A 384 nt0.63□□□□□ -2.31
LSM12P38828 YML099W-AYML099W-A 330 nt0.63□□□□□ -2.31
LSM12P38828 YOR345CYOR345C 351 nt0.63□□□□□ -2.31
LSM12P38828 COX5BYIL111W 456 nt0.62□□□□□ -2.31
LSM12P38828 PAM16YJL104W 450 nt0.62□□□□□ -2.31
LSM12P38828 COX12YLR038C 252 nt0.62□□□□□ -2.31
LSM12P38828 SEC8YPR055W 3198 nt0.62□□□□□ -2.31
LSM12P38828 CLU1YMR012W 3834 nt0.62□□□□□ -2.31
LSM12P38828 snR55snR55 98 nt0.61□□□□□ -2.31
LSM12P38828 UTP10YJL109C 5310 nt0.61□□□□□ -2.31
LSM12P38828 YCR022CYCR022C 345 nt0.6□□□□□ -2.31
LSM12P38828 YER053C-AYER053C-A 114 nt0.6□□□□□ -2.31
LSM12P38828 YBR182C-AYBR182C-A 195 nt0.6□□□□□ -2.31
LSM12P38828 YOR192C-BYOR192C-B 5313 nt0.6□□□□□ -2.31
LSM12P38828 YCR038W-AYCR038W-A 126 nt0.59□□□□□ -2.31
LSM12P38828 snR80snR80 171 nt0.59□□□□□ -2.31
LSM12P38828 YLR399W-AYLR399W-A 105 nt0.59□□□□□ -2.31
LSM12P38828 YOL155W-AYOL155W-A 135 nt0.59□□□□□ -2.31
LSM12P38828 YKU70YMR284W 1809 nt0.59□□□□□ -2.32
LSM12P38828 OST4YDL232W 111 nt0.58□□□□□ -2.32
LSM12P38828 BLI1YKL061W 342 nt0.58□□□□□ -2.32
LSM12P38828 ABF2YMR072W 552 nt0.58□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 15.2 ms