Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 SEC63YOR254C 1992 nt1.87□□□□□ -2.11
TDP1P38319 HMI1YOL095C 2121 nt1.86□□□□□ -2.11
TDP1P38319 SEY1YOR165W 2331 nt1.85□□□□□ -2.11
TDP1P38319 BPH1YCR032W 6504 nt1.85□□□□□ -2.11
TDP1P38319 YGR109W-BYGR109W-B 4644 nt1.85□□□□□ -2.11
TDP1P38319 PRP5YBR237W 2550 nt1.85□□□□□ -2.11
TDP1P38319 YOR019WYOR019W 2193 nt1.85□□□□□ -2.11
TDP1P38319 MSH6YDR097C 3729 nt1.84□□□□□ -2.11
TDP1P38319 TTI1YKL033W 3117 nt1.84□□□□□ -2.11
TDP1P38319 YER172C-AYER172C-A 381 nt1.84□□□□□ -2.11
TDP1P38319 YIL002W-AYIL002W-A 210 nt1.84□□□□□ -2.11
TDP1P38319 YJR039WYJR039W 3366 nt1.83□□□□□ -2.12
TDP1P38319 PKH2YOL100W 3246 nt1.83□□□□□ -2.12
TDP1P38319 LHS1YKL073W 2646 nt1.82□□□□□ -2.12
TDP1P38319 YMR247W-AYMR247W-A 144 nt1.82□□□□□ -2.12
TDP1P38319 IRC20YLR247C 4671 nt1.81□□□□□ -2.12
TDP1P38319 COG4YPR105C 2586 nt1.81□□□□□ -2.12
TDP1P38319 GYP5YPL249C 2685 nt1.81□□□□□ -2.12
TDP1P38319 MYO2YOR326W 4725 nt1.81□□□□□ -2.12
TDP1P38319 YMR175W-AYMR175W-A 195 nt1.81□□□□□ -2.12
TDP1P38319 FRK1YPL141C 2598 nt1.81□□□□□ -2.12
TDP1P38319 YLL054CYLL054C 2532 nt1.8□□□□□ -2.12
TDP1P38319 SOM1YEL059C-A 225 nt1.8□□□□□ -2.12
TDP1P38319 APL1YJR005W 2103 nt1.8□□□□□ -2.12
TDP1P38319 TMA7YLR262C-A 195 nt1.8□□□□□ -2.12
TDP1P38319 CHS6YJL099W 2241 nt1.8□□□□□ -2.12
TDP1P38319 FAB1YFR019W 6837 nt1.79□□□□□ -2.12
TDP1P38319 tT(UGU)HtT(UGU)H 72 nt1.79□□□□□ -2.12
TDP1P38319 SLI15YBR156C 2097 nt1.79□□□□□ -2.12
TDP1P38319 YOR093CYOR093C 4947 nt1.78□□□□□ -2.12
TDP1P38319 TDA9YML081W 3756 nt1.78□□□□□ -2.12
TDP1P38319 MDS3YGL197W 4464 nt1.78□□□□□ -2.12
TDP1P38319 YNL144CYNL144C 2223 nt1.77□□□□□ -2.13
TDP1P38319 YGL041C-BYGL041C-B 183 nt1.77□□□□□ -2.13
TDP1P38319 RTP1YMR185W 2946 nt1.77□□□□□ -2.13
TDP1P38319 YGL182CYGL182C 324 nt1.76□□□□□ -2.13
TDP1P38319 TBS1YBR150C 3285 nt1.76□□□□□ -2.13
TDP1P38319 STF2YGR008C 255 nt1.75□□□□□ -2.13
TDP1P38319 YDL206WYDL206W 2289 nt1.75□□□□□ -2.13
TDP1P38319 UTP21YLR409C 2820 nt1.75□□□□□ -2.13
TDP1P38319 PEP1YBL017C 4740 nt1.75□□□□□ -2.13
TDP1P38319 YLR419WYLR419W 4308 nt1.75□□□□□ -2.13
TDP1P38319 ADR1YDR216W 3972 nt1.74□□□□□ -2.13
TDP1P38319 MON2YNL297C 4911 nt1.74□□□□□ -2.13
TDP1P38319 KIP1YBL063W 3336 nt1.74□□□□□ -2.13
TDP1P38319 YAL067W-AYAL067W-A 228 nt1.74□□□□□ -2.13
TDP1P38319 YMR272W-BYMR272W-B 108 nt1.74□□□□□ -2.13
TDP1P38319 SFB2YNL049C 2631 nt1.74□□□□□ -2.13
TDP1P38319 STB6YKL072W 2301 nt1.73□□□□□ -2.13
TDP1P38319 REV3YPL167C 4515 nt1.72□□□□□ -2.13
TDP1P38319 POL5YEL055C 3069 nt1.72□□□□□ -2.13
TDP1P38319 UFD2YDL190C 2886 nt1.72□□□□□ -2.13
TDP1P38319 YLL020CYLL020C 306 nt1.71□□□□□ -2.14
TDP1P38319 TRM3YDL112W 4311 nt1.71□□□□□ -2.14
TDP1P38319 BFR2YDR299W 1605 nt1.7□□□□□ -2.14
TDP1P38319 YGL123C-AYGL123C-A 231 nt1.7□□□□□ -2.14
TDP1P38319 QCR9YGR183C 201 nt1.7□□□□□ -2.14
TDP1P38319 YIL142C-AYIL142C-A 333 nt1.7□□□□□ -2.14
TDP1P38319 SKI3YPR189W 4299 nt1.7□□□□□ -2.14
TDP1P38319 VPS15YBR097W 4365 nt1.7□□□□□ -2.14
TDP1P38319 UTP8YGR128C 2142 nt1.69□□□□□ -2.14
TDP1P38319 YBL039C-AYBL039C-A 84 nt1.69□□□□□ -2.14
TDP1P38319 SPO24YPR036W-A 204 nt1.69□□□□□ -2.14
TDP1P38319 YHR131W-AYHR131W-A 246 nt1.68□□□□□ -2.14
TDP1P38319 snR39BsnR39B 96 nt1.68□□□□□ -2.14
TDP1P38319 PKH3YDR466W 2697 nt1.68□□□□□ -2.14
TDP1P38319 EAF1YDR359C 2949 nt1.67□□□□□ -2.14
TDP1P38319 NUT1YGL151W 3399 nt1.67□□□□□ -2.14
TDP1P38319 YOR161W-AYOR161W-A 81 nt1.66□□□□□ -2.14
TDP1P38319 RCO1YMR075W 2055 nt1.65□□□□□ -2.14
TDP1P38319 EMC5YIL027C 426 nt1.65□□□□□ -2.15
TDP1P38319 KCS1YDR017C 3153 nt1.64□□□□□ -2.15
TDP1P38319 tS(GCU)Q1tS(GCU)Q1 86 nt1.64□□□□□ -2.15
TDP1P38319 ANS1YHR126C 480 nt1.64□□□□□ -2.15
TDP1P38319 YKL100W-AYKL100W-A 90 nt1.64□□□□□ -2.15
TDP1P38319 COA6YMR244C-A 315 nt1.64□□□□□ -2.15
TDP1P38319 DNF3YMR162C 4971 nt1.63□□□□□ -2.15
TDP1P38319 ALY2YJL084C 3141 nt1.63□□□□□ -2.15
TDP1P38319 RSM22YKL155C 1887 nt1.63□□□□□ -2.15
TDP1P38319 TAH1YCR060W 336 nt1.63□□□□□ -2.15
TDP1P38319 COX5BYIL111W 456 nt1.63□□□□□ -2.15
TDP1P38319 RAD50YNL250W 3939 nt1.63□□□□□ -2.15
TDP1P38319 PAN2YGL094C 3348 nt1.62□□□□□ -2.15
TDP1P38319 SMC4YLR086W 4257 nt1.62□□□□□ -2.15
TDP1P38319 MEC1YBR136W 7107 nt1.6□□□□□ -2.15
TDP1P38319 NUP157YER105C 4176 nt1.6□□□□□ -2.15
TDP1P38319 YLL066W-BYLL066W-B 171 nt1.59□□□□□ -2.15
TDP1P38319 KAP122YGL016W 3246 nt1.58□□□□□ -2.16
TDP1P38319 MMS4YBR098W 2076 nt1.58□□□□□ -2.16
TDP1P38319 PMD1YER132C 5262 nt1.58□□□□□ -2.16
TDP1P38319 COG6YNL041C 2520 nt1.58□□□□□ -2.16
TDP1P38319 SLX4YLR135W 2247 nt1.57□□□□□ -2.16
TDP1P38319 tM(CAU)Q2tM(CAU)Q2 78 nt1.57□□□□□ -2.16
TDP1P38319 YAR009CYAR009C 3591 nt1.57□□□□□ -2.16
TDP1P38319 CFT1YDR301W 4074 nt1.56□□□□□ -2.16
TDP1P38319 IRA1YBR140C 9279 nt1.56□□□□□ -2.16
TDP1P38319 snR45snR45 172 nt1.56□□□□□ -2.16
TDP1P38319 YML002WYML002W 2214 nt1.55□□□□□ -2.16
TDP1P38319 snR81snR81 201 nt1.55□□□□□ -2.16
TDP1P38319 BST1YFL025C 3090 nt1.55□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 104.7 ms