Protein–RNA interactions for Protein: P38200

SHE1, Mitotic spindle-associated protein SHE1, yeastyeast

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHE1P38200 YMR031W-AYMR031W-A 327 nt0.83□□□□□ -2.28
SHE1P38200 CSE2YNR010W 450 nt0.83□□□□□ -2.28
SHE1P38200 CLU1YMR012W 3834 nt0.82□□□□□ -2.28
SHE1P38200 IES4YOR189W 351 nt0.82□□□□□ -2.28
SHE1P38200 PAU24YBR301W 363 nt0.82□□□□□ -2.28
SHE1P38200 DOP1YDR141C 5097 nt0.81□□□□□ -2.28
SHE1P38200 YDL196WYDL196W 330 nt0.81□□□□□ -2.28
SHE1P38200 EMT1tM(CAU)D 73 nt0.81□□□□□ -2.28
SHE1P38200 EMT5tM(CAU)J1 73 nt0.81□□□□□ -2.28
SHE1P38200 EMT3tM(CAU)J2 73 nt0.81□□□□□ -2.28
SHE1P38200 EMT4tM(CAU)M 73 nt0.81□□□□□ -2.28
SHE1P38200 EMT2tM(CAU)O2 73 nt0.81□□□□□ -2.28
SHE1P38200 CMC4YMR194C-B 222 nt0.8□□□□□ -2.28
SHE1P38200 YNL028WYNL028W 318 nt0.8□□□□□ -2.28
SHE1P38200 YNL211CYNL211C 261 nt0.8□□□□□ -2.28
SHE1P38200 ISD11YER048W-A 285 nt0.79□□□□□ -2.28
SHE1P38200 YPL044CYPL044C 549 nt0.79□□□□□ -2.28
SHE1P38200 YPR117WYPR117W 7470 nt0.79□□□□□ -2.28
SHE1P38200 NOP9YJL010C 2001 nt0.78□□□□□ -2.28
SHE1P38200 RKR1YMR247C 4689 nt0.78□□□□□ -2.29
SHE1P38200 BFR2YDR299W 1605 nt0.78□□□□□ -2.29
SHE1P38200 RAD61YDR014W 1944 nt0.77□□□□□ -2.29
SHE1P38200 YGR069WYGR069W 336 nt0.77□□□□□ -2.29
SHE1P38200 YOR282WYOR282W 321 nt0.77□□□□□ -2.29
SHE1P38200 PAA1YDR071C 576 nt0.76□□□□□ -2.29
SHE1P38200 YDR354C-AYDR354C-A 144 nt0.75□□□□□ -2.29
SHE1P38200 YFR012W-AYFR012W-A 87 nt0.75□□□□□ -2.29
SHE1P38200 YNL146WYNL146W 303 nt0.75□□□□□ -2.29
SHE1P38200 KAP120YPL125W 3099 nt0.75□□□□□ -2.29
SHE1P38200 YPR010C-AYPR010C-A 219 nt0.74□□□□□ -2.29
SHE1P38200 YOR015WYOR015W 360 nt0.73□□□□□ -2.29
SHE1P38200 RPL26BYGR034W 384 nt0.72□□□□□ -2.29
SHE1P38200 YNL277W-AYNL277W-A 189 nt0.72□□□□□ -2.29
SHE1P38200 YCR018C-AYCR018C-A 255 nt0.71□□□□□ -2.3
SHE1P38200 YLL019W-AYLL019W-A 93 nt0.71□□□□□ -2.3
SHE1P38200 YLR120W-AYLR120W-A 102 nt0.71□□□□□ -2.3
SHE1P38200 PMP1YCR024C-A 123 nt0.7□□□□□ -2.3
SHE1P38200 snR65snR65 100 nt0.7□□□□□ -2.3
SHE1P38200 YJL197C-AYJL197C-A 282 nt0.7□□□□□ -2.3
SHE1P38200 YPR092WYPR092W 306 nt0.7□□□□□ -2.3
SHE1P38200 SEC1YDR164C 2175 nt0.7□□□□□ -2.3
SHE1P38200 YOR008C-AYOR008C-A 225 nt0.69□□□□□ -2.3
SHE1P38200 UBP3YER151C 2739 nt0.68□□□□□ -2.3
SHE1P38200 YDL185C-AYDL185C-A 228 nt0.68□□□□□ -2.3
SHE1P38200 YGL052WYGL052W 306 nt0.68□□□□□ -2.3
SHE1P38200 YHR063W-AYHR063W-A 336 nt0.68□□□□□ -2.3
SHE1P38200 YAL067W-AYAL067W-A 228 nt0.68□□□□□ -2.3
SHE1P38200 YOR072W-BYOR072W-B 162 nt0.68□□□□□ -2.3
SHE1P38200 NPR2YEL062W 1848 nt0.68□□□□□ -2.3
SHE1P38200 ASE1YOR058C 2658 nt0.68□□□□□ -2.3
SHE1P38200 YMR172C-AYMR172C-A 384 nt0.67□□□□□ -2.3
SHE1P38200 YEL020C-BYEL020C-B 198 nt0.66□□□□□ -2.3
SHE1P38200 snR74snR74 88 nt0.65□□□□□ -2.31
SHE1P38200 YJL026C-AYJL026C-A 222 nt0.65□□□□□ -2.31
SHE1P38200 snR190snR190 190 nt0.65□□□□□ -2.31
SHE1P38200 COY1YKL179C 2040 nt0.64□□□□□ -2.31
SHE1P38200 CHS6YJL099W 2241 nt0.64□□□□□ -2.31
SHE1P38200 PAM16YJL104W 450 nt0.64□□□□□ -2.31
SHE1P38200 YOR231C-AYOR231C-A 201 nt0.64□□□□□ -2.31
SHE1P38200 YML002WYML002W 2214 nt0.63□□□□□ -2.31
SHE1P38200 YDL073WYDL073W 2955 nt0.63□□□□□ -2.31
SHE1P38200 YLR282CYLR282C 342 nt0.62□□□□□ -2.31
SHE1P38200 YMR307C-AYMR307C-A 195 nt0.62□□□□□ -2.31
SHE1P38200 PRP16YKR086W 3216 nt0.62□□□□□ -2.31
SHE1P38200 SEC8YPR055W 3198 nt0.61□□□□□ -2.31
SHE1P38200 COX5BYIL111W 456 nt0.61□□□□□ -2.31
SHE1P38200 YOR161W-AYOR161W-A 81 nt0.6□□□□□ -2.31
SHE1P38200 YGL123C-AYGL123C-A 231 nt0.59□□□□□ -2.31
SHE1P38200 tT(AGU)BtT(AGU)B 73 nt0.59□□□□□ -2.31
SHE1P38200 tT(AGU)CtT(AGU)C 73 nt0.59□□□□□ -2.31
SHE1P38200 tT(AGU)DtT(AGU)D 73 nt0.59□□□□□ -2.31
SHE1P38200 tT(AGU)HtT(AGU)H 73 nt0.59□□□□□ -2.31
SHE1P38200 tT(AGU)I1tT(AGU)I1 73 nt0.59□□□□□ -2.31
SHE1P38200 tT(AGU)I2tT(AGU)I2 73 nt0.59□□□□□ -2.31
SHE1P38200 tT(AGU)JtT(AGU)J 73 nt0.59□□□□□ -2.31
SHE1P38200 tT(AGU)N1tT(AGU)N1 73 nt0.59□□□□□ -2.31
SHE1P38200 tT(AGU)N2tT(AGU)N2 73 nt0.59□□□□□ -2.31
SHE1P38200 tT(AGU)O1tT(AGU)O1 73 nt0.59□□□□□ -2.31
SHE1P38200 tT(AGU)O2tT(AGU)O2 73 nt0.59□□□□□ -2.31
SHE1P38200 YPR160W-AYPR160W-A 81 nt0.59□□□□□ -2.31
SHE1P38200 MYO1YHR023W 5787 nt0.59□□□□□ -2.32
SHE1P38200 YER181CYER181C 324 nt0.58□□□□□ -2.32
SHE1P38200 BLI1YKL061W 342 nt0.58□□□□□ -2.32
SHE1P38200 YPL152W-AYPL152W-A 99 nt0.58□□□□□ -2.32
SHE1P38200 snR49snR49 165 nt0.58□□□□□ -2.32
SHE1P38200 FYV10YIL097W 1551 nt0.57□□□□□ -2.32
SHE1P38200 snR55snR55 98 nt0.57□□□□□ -2.32
SHE1P38200 YLR399W-AYLR399W-A 105 nt0.57□□□□□ -2.32
SHE1P38200 YMR272W-AYMR272W-A 114 nt0.57□□□□□ -2.32
SHE1P38200 RPS30BYOR182C 192 nt0.57□□□□□ -2.32
SHE1P38200 UTP10YJL109C 5310 nt0.56□□□□□ -2.32
SHE1P38200 ULI1YFR026C 510 nt0.56□□□□□ -2.32
SHE1P38200 STF2YGR008C 255 nt0.56□□□□□ -2.32
SHE1P38200 YIL142C-AYIL142C-A 333 nt0.56□□□□□ -2.32
SHE1P38200 YPR159C-AYPR159C-A 102 nt0.56□□□□□ -2.32
SHE1P38200 PRP5YBR237W 2550 nt0.55□□□□□ -2.32
SHE1P38200 tN(GUU)QtN(GUU)Q 71 nt0.55□□□□□ -2.32
SHE1P38200 YML099W-AYML099W-A 330 nt0.55□□□□□ -2.32
SHE1P38200 YGL041CYGL041C 204 nt0.54□□□□□ -2.32
SHE1P38200 YIR030W-AYIR030W-A 384 nt0.54□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 58.7 ms