Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PDE6BP35913 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
PDE6BP35913 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PDE6BP35913 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PDE6BP35913 TSPY14P-201ENST00000303979 915 ntBASIC24.81■■□□□ 1.56
PDE6BP35913 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PDE6BP35913 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC24.81■■□□□ 1.56
PDE6BP35913 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC24.81■■□□□ 1.56
PDE6BP35913 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC24.81■■□□□ 1.56
PDE6BP35913 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC24.81■■□□□ 1.56
PDE6BP35913 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC24.81■■□□□ 1.56
PDE6BP35913 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC24.81■■□□□ 1.56
PDE6BP35913 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
PDE6BP35913 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
PDE6BP35913 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PDE6BP35913 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC24.81■■□□□ 1.56
PDE6BP35913 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PDE6BP35913 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PDE6BP35913 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC24.8■■□□□ 1.56
PDE6BP35913 GUSBP5-202ENST00000510805 1989 ntBASIC24.8■■□□□ 1.56
PDE6BP35913 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC24.8■■□□□ 1.56
PDE6BP35913 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PDE6BP35913 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PDE6BP35913 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
PDE6BP35913 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC24.8■■□□□ 1.56
PDE6BP35913 DGCR10-201ENST00000609839 495 ntBASIC24.8■■□□□ 1.56
PDE6BP35913 AL445675.2-201ENST00000620291 557 ntBASIC24.8■■□□□ 1.56
PDE6BP35913 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
PDE6BP35913 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PDE6BP35913 GALC-202ENST00000393568 2054 ntTSL 2 BASIC24.8■■□□□ 1.56
PDE6BP35913 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PDE6BP35913 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC24.8■■□□□ 1.56
PDE6BP35913 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC24.8■■□□□ 1.56
PDE6BP35913 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC24.8■■□□□ 1.56
PDE6BP35913 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PDE6BP35913 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PDE6BP35913 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC24.8■■□□□ 1.56
PDE6BP35913 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
PDE6BP35913 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PDE6BP35913 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC24.79■■□□□ 1.56
PDE6BP35913 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC24.79■■□□□ 1.56
PDE6BP35913 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PDE6BP35913 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PDE6BP35913 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PDE6BP35913 ECEL1P2-202ENST00000465689 757 ntBASIC24.79■■□□□ 1.56
PDE6BP35913 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PDE6BP35913 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC24.79■■□□□ 1.56
PDE6BP35913 C1QL1P1-201ENST00000568105 661 ntBASIC24.79■■□□□ 1.56
PDE6BP35913 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PDE6BP35913 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC24.79■■□□□ 1.56
PDE6BP35913 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
PDE6BP35913 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PDE6BP35913 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24.79■■□□□ 1.56
PDE6BP35913 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC24.79■■□□□ 1.56
PDE6BP35913 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PDE6BP35913 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
PDE6BP35913 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC24.78■■□□□ 1.56
PDE6BP35913 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC24.78■■□□□ 1.56
PDE6BP35913 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PDE6BP35913 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PDE6BP35913 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
PDE6BP35913 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC24.78■■□□□ 1.56
PDE6BP35913 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PDE6BP35913 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC24.78■■□□□ 1.56
PDE6BP35913 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC24.78■■□□□ 1.56
PDE6BP35913 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC24.78■■□□□ 1.56
PDE6BP35913 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PDE6BP35913 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PDE6BP35913 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC24.77■■□□□ 1.56
PDE6BP35913 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PDE6BP35913 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC24.77■■□□□ 1.56
PDE6BP35913 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC24.77■■□□□ 1.56
PDE6BP35913 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC24.77■■□□□ 1.56
PDE6BP35913 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
PDE6BP35913 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC24.77■■□□□ 1.56
PDE6BP35913 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC24.77■■□□□ 1.56
PDE6BP35913 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.77■■□□□ 1.56
PDE6BP35913 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
PDE6BP35913 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC24.76■■□□□ 1.55
PDE6BP35913 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
PDE6BP35913 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
PDE6BP35913 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC24.76■■□□□ 1.55
PDE6BP35913 B3GAT3P1-201ENST00000471720 806 ntBASIC24.76■■□□□ 1.55
PDE6BP35913 AC128688.1-201ENST00000487626 519 ntBASIC24.76■■□□□ 1.55
PDE6BP35913 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC24.76■■□□□ 1.55
PDE6BP35913 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC24.76■■□□□ 1.55
PDE6BP35913 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC24.76■■□□□ 1.55
PDE6BP35913 ABBA01031674.1-201ENST00000635145 728 ntBASIC24.76■■□□□ 1.55
PDE6BP35913 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
PDE6BP35913 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC24.76■■□□□ 1.55
PDE6BP35913 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC24.76■■□□□ 1.55
PDE6BP35913 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PDE6BP35913 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC24.75■■□□□ 1.55
PDE6BP35913 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
PDE6BP35913 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PDE6BP35913 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PDE6BP35913 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC24.75■■□□□ 1.55
PDE6BP35913 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PDE6BP35913 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PDE6BP35913 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms