Protein–RNA interactions for Protein: P33308

CSE2, Mediator of RNA polymerase II transcription subunit 9, yeastyeast

Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CSE2P33308 CDC36YDL165W 576 nt1.08□□□□□ -2.24
CSE2P33308 YLL020CYLL020C 306 nt1.08□□□□□ -2.24
CSE2P33308 ROM2YLR371W 4071 nt1.08□□□□□ -2.24
CSE2P33308 APL3YBL037W 3078 nt1.08□□□□□ -2.24
CSE2P33308 MCM10YIL150C 1716 nt1.07□□□□□ -2.24
CSE2P33308 NUP145YGL092W 3954 nt1.07□□□□□ -2.24
CSE2P33308 YGL188C-AYGL188C-A 141 nt1.07□□□□□ -2.24
CSE2P33308 YPR092WYPR092W 306 nt1.07□□□□□ -2.24
CSE2P33308 MSN5YDR335W 3675 nt1.06□□□□□ -2.24
CSE2P33308 ECM12YHR021W-A 456 nt1.06□□□□□ -2.24
CSE2P33308 SPT7YBR081C 3999 nt1.06□□□□□ -2.24
CSE2P33308 SMC1YFL008W 3678 nt1.05□□□□□ -2.24
CSE2P33308 YDR366CYDR366C 399 nt1.05□□□□□ -2.24
CSE2P33308 snR55snR55 98 nt1.04□□□□□ -2.24
CSE2P33308 CLU1YMR012W 3834 nt1.04□□□□□ -2.24
CSE2P33308 YMR307C-AYMR307C-A 195 nt1.04□□□□□ -2.24
CSE2P33308 YOL155W-AYOL155W-A 135 nt1.04□□□□□ -2.24
CSE2P33308 YBR200W-AYBR200W-A 165 nt1.04□□□□□ -2.24
CSE2P33308 SAC3YDR159W 3906 nt1.04□□□□□ -2.24
CSE2P33308 WAR1YML076C 2835 nt1.04□□□□□ -2.24
CSE2P33308 EAF1YDR359C 2949 nt1.04□□□□□ -2.24
CSE2P33308 YJR029WYJR029W 5268 nt1.03□□□□□ -2.24
CSE2P33308 YPR137C-BYPR137C-B 5268 nt1.03□□□□□ -2.24
CSE2P33308 RSM22YKL155C 1887 nt1.03□□□□□ -2.24
CSE2P33308 ABF2YMR072W 552 nt1.03□□□□□ -2.24
CSE2P33308 SGF11YPL047W 300 nt1.03□□□□□ -2.24
CSE2P33308 snR74snR74 88 nt1.02□□□□□ -2.25
CSE2P33308 SEC3YER008C 4011 nt1.02□□□□□ -2.25
CSE2P33308 YGL041CYGL041C 204 nt1.02□□□□□ -2.25
CSE2P33308 QCR9YGR183C 201 nt1.02□□□□□ -2.25
CSE2P33308 CDC39YCR093W 6327 nt1.01□□□□□ -2.25
CSE2P33308 tF(GAA)BtF(GAA)B 73 nt1.01□□□□□ -2.25
CSE2P33308 tF(GAA)FtF(GAA)F 73 nt1.01□□□□□ -2.25
CSE2P33308 tF(GAA)GtF(GAA)G 73 nt1.01□□□□□ -2.25
CSE2P33308 tF(GAA)H1tF(GAA)H1 73 nt1.01□□□□□ -2.25
CSE2P33308 tF(GAA)H2tF(GAA)H2 73 nt1.01□□□□□ -2.25
CSE2P33308 tF(GAA)MtF(GAA)M 73 nt1.01□□□□□ -2.25
CSE2P33308 tF(GAA)P1tF(GAA)P1 73 nt1.01□□□□□ -2.25
CSE2P33308 tF(GAA)P2tF(GAA)P2 73 nt1.01□□□□□ -2.25
CSE2P33308 OLI1Q0130 231 nt1.01□□□□□ -2.25
CSE2P33308 RRT15YLR162W-A 189 nt1.01□□□□□ -2.25
CSE2P33308 YOR072W-BYOR072W-B 162 nt1.01□□□□□ -2.25
CSE2P33308 RAD9YDR217C 3930 nt1.01□□□□□ -2.25
CSE2P33308 snR80snR80 171 nt1□□□□□ -2.25
CSE2P33308 STB6YKL072W 2301 nt1□□□□□ -2.25
CSE2P33308 tF(GAA)QtF(GAA)Q 75 nt0.99□□□□□ -2.25
CSE2P33308 NST1YNL091W 3723 nt0.99□□□□□ -2.25
CSE2P33308 GEA2YEL022W 4380 nt0.99□□□□□ -2.25
CSE2P33308 YDR354C-AYDR354C-A 144 nt0.98□□□□□ -2.25
CSE2P33308 YLL019W-AYLL019W-A 93 nt0.98□□□□□ -2.25
CSE2P33308 YMR158W-BYMR158W-B 321 nt0.98□□□□□ -2.25
CSE2P33308 BEM2YER155C 6504 nt0.98□□□□□ -2.25
CSE2P33308 YBR182C-AYBR182C-A 195 nt0.97□□□□□ -2.25
CSE2P33308 NUP157YER105C 4176 nt0.97□□□□□ -2.25
CSE2P33308 NPR2YEL062W 1848 nt0.96□□□□□ -2.26
CSE2P33308 YNL211CYNL211C 261 nt0.96□□□□□ -2.26
CSE2P33308 YKU70YMR284W 1809 nt0.95□□□□□ -2.26
CSE2P33308 PAA1YDR071C 576 nt0.95□□□□□ -2.26
CSE2P33308 YIR030W-AYIR030W-A 384 nt0.95□□□□□ -2.26
CSE2P33308 YJL026C-AYJL026C-A 222 nt0.95□□□□□ -2.26
CSE2P33308 APL1YJR005W 2103 nt0.95□□□□□ -2.26
CSE2P33308 BUD3YCL014W 4911 nt0.94□□□□□ -2.26
CSE2P33308 YDL196WYDL196W 330 nt0.94□□□□□ -2.26
CSE2P33308 YIL142C-AYIL142C-A 333 nt0.94□□□□□ -2.26
CSE2P33308 CMC4YMR194C-B 222 nt0.94□□□□□ -2.26
CSE2P33308 NOP9YJL010C 2001 nt0.94□□□□□ -2.26
CSE2P33308 YAL067W-AYAL067W-A 228 nt0.93□□□□□ -2.26
CSE2P33308 YPL044CYPL044C 549 nt0.93□□□□□ -2.26
CSE2P33308 ISD11YER048W-A 285 nt0.92□□□□□ -2.26
CSE2P33308 YOR302WYOR302W 78 nt0.9□□□□□ -2.27
CSE2P33308 SPG3YDR504C 384 nt0.89□□□□□ -2.27
CSE2P33308 RPL26BYGR034W 384 nt0.89□□□□□ -2.27
CSE2P33308 YCR018C-AYCR018C-A 255 nt0.88□□□□□ -2.27
CSE2P33308 ULI1YFR026C 510 nt0.88□□□□□ -2.27
CSE2P33308 YFR012W-AYFR012W-A 87 nt0.87□□□□□ -2.27
CSE2P33308 YOR345CYOR345C 351 nt0.87□□□□□ -2.27
CSE2P33308 YDL185C-AYDL185C-A 228 nt0.86□□□□□ -2.27
CSE2P33308 EMT1tM(CAU)D 73 nt0.86□□□□□ -2.27
CSE2P33308 EMT5tM(CAU)J1 73 nt0.86□□□□□ -2.27
CSE2P33308 EMT3tM(CAU)J2 73 nt0.86□□□□□ -2.27
CSE2P33308 EMT4tM(CAU)M 73 nt0.86□□□□□ -2.27
CSE2P33308 EMT2tM(CAU)O2 73 nt0.86□□□□□ -2.27
CSE2P33308 KAP120YPL125W 3099 nt0.86□□□□□ -2.27
CSE2P33308 VAM6YDL077C 3150 nt0.85□□□□□ -2.27
CSE2P33308 YOL014WYOL014W 375 nt0.85□□□□□ -2.27
CSE2P33308 BLI1YKL061W 342 nt0.84□□□□□ -2.27
CSE2P33308 JLP2YMR132C 627 nt0.84□□□□□ -2.27
CSE2P33308 YBR131C-AYBR131C-A 90 nt0.84□□□□□ -2.27
CSE2P33308 ASE1YOR058C 2658 nt0.84□□□□□ -2.28
CSE2P33308 COY1YKL179C 2040 nt0.83□□□□□ -2.28
CSE2P33308 APQ12YIL040W 417 nt0.83□□□□□ -2.28
CSE2P33308 YMR046W-AYMR046W-A 129 nt0.83□□□□□ -2.28
CSE2P33308 RKR1YMR247C 4689 nt0.83□□□□□ -2.28
CSE2P33308 PMP1YCR024C-A 123 nt0.82□□□□□ -2.28
CSE2P33308 YGL123C-AYGL123C-A 231 nt0.82□□□□□ -2.28
CSE2P33308 tM(CAU)Q1tM(CAU)Q1 76 nt0.82□□□□□ -2.28
CSE2P33308 COX12YLR038C 252 nt0.82□□□□□ -2.28
CSE2P33308 YLR282CYLR282C 342 nt0.82□□□□□ -2.28
CSE2P33308 snR190snR190 190 nt0.82□□□□□ -2.28
CSE2P33308 YMR160WYMR160W 2451 nt0.82□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 27.5 ms