Protein–RNA interactions for Protein: P32445

RIM1, Single-stranded DNA-binding protein RIM1, mitochondrial, yeastyeast

Known RBP Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIM1P32445 BFR2YDR299W 1605 nt0.83□□□□□ -2.28
RIM1P32445 INA22YIR024C 651 nt0.83□□□□□ -2.28
RIM1P32445 IES4YOR189W 351 nt0.83□□□□□ -2.28
RIM1P32445 snR36snR36 182 nt0.83□□□□□ -2.28
RIM1P32445 YFL063WYFL063W 456 nt0.82□□□□□ -2.28
RIM1P32445 RPS27BYHR021C 249 nt0.82□□□□□ -2.28
RIM1P32445 YNL211CYNL211C 261 nt0.82□□□□□ -2.28
RIM1P32445 ASE1YOR058C 2658 nt0.81□□□□□ -2.28
RIM1P32445 YIL032CYIL032C 357 nt0.81□□□□□ -2.28
RIM1P32445 YKL118WYKL118W 312 nt0.81□□□□□ -2.28
RIM1P32445 VIK1YPL253C 1944 nt0.81□□□□□ -2.28
RIM1P32445 STF2YGR008C 255 nt0.8□□□□□ -2.28
RIM1P32445 RPL26BYGR034W 384 nt0.8□□□□□ -2.28
RIM1P32445 YOR218CYOR218C 420 nt0.8□□□□□ -2.28
RIM1P32445 SGF11YPL047W 300 nt0.8□□□□□ -2.28
RIM1P32445 snR60snR60 104 nt0.79□□□□□ -2.28
RIM1P32445 YGL149WYGL149W 306 nt0.79□□□□□ -2.28
RIM1P32445 YMR193C-AYMR193C-A 387 nt0.79□□□□□ -2.28
RIM1P32445 YFL032WYFL032W 321 nt0.78□□□□□ -2.28
RIM1P32445 RPL39YJL189W 156 nt0.78□□□□□ -2.28
RIM1P32445 NHP2YDL208W 471 nt0.77□□□□□ -2.29
RIM1P32445 YHR063W-AYHR063W-A 336 nt0.77□□□□□ -2.29
RIM1P32445 CSE2YNR010W 450 nt0.77□□□□□ -2.29
RIM1P32445 RKR1YMR247C 4689 nt0.76□□□□□ -2.29
RIM1P32445 YER097WYER097W 330 nt0.76□□□□□ -2.29
RIM1P32445 YFR012W-AYFR012W-A 87 nt0.76□□□□□ -2.29
RIM1P32445 YKL136WYKL136W 399 nt0.76□□□□□ -2.29
RIM1P32445 HUG1YML058W-A 207 nt0.76□□□□□ -2.29
RIM1P32445 YDR413CYDR413C 576 nt0.75□□□□□ -2.29
RIM1P32445 YIL142C-AYIL142C-A 333 nt0.75□□□□□ -2.29
RIM1P32445 PAM16YJL104W 450 nt0.75□□□□□ -2.29
RIM1P32445 YAL067W-AYAL067W-A 228 nt0.75□□□□□ -2.29
RIM1P32445 SEC8YPR055W 3198 nt0.73□□□□□ -2.29
RIM1P32445 LTE1YAL024C 4308 nt0.73□□□□□ -2.29
RIM1P32445 NPR2YEL062W 1848 nt0.73□□□□□ -2.29
RIM1P32445 STE5YDR103W 2754 nt0.73□□□□□ -2.29
RIM1P32445 CHS6YJL099W 2241 nt0.72□□□□□ -2.29
RIM1P32445 YJL026C-AYJL026C-A 222 nt0.72□□□□□ -2.29
RIM1P32445 SEC1YDR164C 2175 nt0.72□□□□□ -2.29
RIM1P32445 YDR354C-AYDR354C-A 144 nt0.71□□□□□ -2.3
RIM1P32445 YNL028WYNL028W 318 nt0.71□□□□□ -2.3
RIM1P32445 YPR160W-AYPR160W-A 81 nt0.71□□□□□ -2.3
RIM1P32445 HAL9YOL089C 3093 nt0.7□□□□□ -2.3
RIM1P32445 YDL185C-AYDL185C-A 228 nt0.7□□□□□ -2.3
RIM1P32445 tT(AGU)BtT(AGU)B 73 nt0.7□□□□□ -2.3
RIM1P32445 tT(AGU)CtT(AGU)C 73 nt0.7□□□□□ -2.3
RIM1P32445 tT(AGU)DtT(AGU)D 73 nt0.7□□□□□ -2.3
RIM1P32445 tT(AGU)HtT(AGU)H 73 nt0.7□□□□□ -2.3
RIM1P32445 tT(AGU)I1tT(AGU)I1 73 nt0.7□□□□□ -2.3
RIM1P32445 tT(AGU)I2tT(AGU)I2 73 nt0.7□□□□□ -2.3
RIM1P32445 tT(AGU)JtT(AGU)J 73 nt0.7□□□□□ -2.3
RIM1P32445 tT(AGU)N1tT(AGU)N1 73 nt0.7□□□□□ -2.3
RIM1P32445 tT(AGU)N2tT(AGU)N2 73 nt0.7□□□□□ -2.3
RIM1P32445 tT(AGU)O1tT(AGU)O1 73 nt0.7□□□□□ -2.3
RIM1P32445 tT(AGU)O2tT(AGU)O2 73 nt0.7□□□□□ -2.3
RIM1P32445 YLR399W-AYLR399W-A 105 nt0.7□□□□□ -2.3
RIM1P32445 YDR524W-CYDR524W-C 90 nt0.69□□□□□ -2.3
RIM1P32445 UTP20YBL004W 7482 nt0.69□□□□□ -2.3
RIM1P32445 FYV10YIL097W 1551 nt0.68□□□□□ -2.3
RIM1P32445 YJL197C-AYJL197C-A 282 nt0.67□□□□□ -2.3
RIM1P32445 YMR307C-AYMR307C-A 195 nt0.67□□□□□ -2.3
RIM1P32445 YCR018C-AYCR018C-A 255 nt0.66□□□□□ -2.3
RIM1P32445 RPS30BYOR182C 192 nt0.66□□□□□ -2.3
RIM1P32445 snR190snR190 190 nt0.66□□□□□ -2.3
RIM1P32445 YPR159C-AYPR159C-A 102 nt0.66□□□□□ -2.3
RIM1P32445 BEM3YPL115C 3387 nt0.66□□□□□ -2.3
RIM1P32445 PRP5YBR237W 2550 nt0.65□□□□□ -2.3
RIM1P32445 YML002WYML002W 2214 nt0.65□□□□□ -2.3
RIM1P32445 YEL020C-BYEL020C-B 198 nt0.65□□□□□ -2.31
RIM1P32445 YLR120W-AYLR120W-A 102 nt0.65□□□□□ -2.31
RIM1P32445 YOR015WYOR015W 360 nt0.64□□□□□ -2.31
RIM1P32445 RAD61YDR014W 1944 nt0.64□□□□□ -2.31
RIM1P32445 YMR272W-AYMR272W-A 114 nt0.62□□□□□ -2.31
RIM1P32445 YMR160WYMR160W 2451 nt0.61□□□□□ -2.31
RIM1P32445 OST4YDL232W 111 nt0.61□□□□□ -2.31
RIM1P32445 COX5BYIL111W 456 nt0.61□□□□□ -2.31
RIM1P32445 YLL019W-AYLL019W-A 93 nt0.6□□□□□ -2.31
RIM1P32445 YOR008C-AYOR008C-A 225 nt0.6□□□□□ -2.31
RIM1P32445 YJL127W-AYJL127W-A 117 nt0.59□□□□□ -2.31
RIM1P32445 YLR282CYLR282C 342 nt0.59□□□□□ -2.31
RIM1P32445 YOR072W-BYOR072W-B 162 nt0.59□□□□□ -2.31
RIM1P32445 PRP42YDR235W 1635 nt0.58□□□□□ -2.32
RIM1P32445 YIL134C-AYIL134C-A 204 nt0.58□□□□□ -2.32
RIM1P32445 YMR172C-AYMR172C-A 384 nt0.58□□□□□ -2.32
RIM1P32445 YMR031W-AYMR031W-A 327 nt0.57□□□□□ -2.32
RIM1P32445 YNL277W-AYNL277W-A 189 nt0.57□□□□□ -2.32
RIM1P32445 YPR092WYPR092W 306 nt0.57□□□□□ -2.32
RIM1P32445 COY1YKL179C 2040 nt0.57□□□□□ -2.32
RIM1P32445 YCR022CYCR022C 345 nt0.56□□□□□ -2.32
RIM1P32445 YGL052WYGL052W 306 nt0.56□□□□□ -2.32
RIM1P32445 YSP1YHR155W 3687 nt0.55□□□□□ -2.32
RIM1P32445 YGL123C-AYGL123C-A 231 nt0.55□□□□□ -2.32
RIM1P32445 YGR069WYGR069W 336 nt0.55□□□□□ -2.32
RIM1P32445 YKL100W-AYKL100W-A 90 nt0.55□□□□□ -2.32
RIM1P32445 ULI1YFR026C 510 nt0.54□□□□□ -2.32
RIM1P32445 BLI1YKL061W 342 nt0.54□□□□□ -2.32
RIM1P32445 IQG1YPL242C 4488 nt0.53□□□□□ -2.32
RIM1P32445 snR65snR65 100 nt0.53□□□□□ -2.32
RIM1P32445 tN(GUU)QtN(GUU)Q 71 nt0.53□□□□□ -2.32
RIM1P32445 YLR041WYLR041W 321 nt0.53□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 18.5 ms