Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 AL031963.3-201ENST00000606441 850 ntBASIC20.44■□□□□ 0.86
PTPN3P26045 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.44■□□□□ 0.86
PTPN3P26045 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.44■□□□□ 0.86
PTPN3P26045 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.44■□□□□ 0.86
PTPN3P26045 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PTPN3P26045 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.44■□□□□ 0.86
PTPN3P26045 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN3P26045 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN3P26045 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.43■□□□□ 0.86
PTPN3P26045 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.43■□□□□ 0.86
PTPN3P26045 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.43■□□□□ 0.86
PTPN3P26045 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.43■□□□□ 0.86
PTPN3P26045 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.43■□□□□ 0.86
PTPN3P26045 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN3P26045 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN3P26045 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.42■□□□□ 0.86
PTPN3P26045 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.42■□□□□ 0.86
PTPN3P26045 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PTPN3P26045 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN3P26045 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN3P26045 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN3P26045 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN3P26045 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN3P26045 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN3P26045 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PTPN3P26045 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.42■□□□□ 0.86
PTPN3P26045 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
PTPN3P26045 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
PTPN3P26045 TSPY6P-201ENST00000448518 926 ntBASIC20.42■□□□□ 0.86
PTPN3P26045 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN3P26045 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PTPN3P26045 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.42■□□□□ 0.86
PTPN3P26045 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN3P26045 KRT8P20-201ENST00000423953 1409 ntBASIC20.42■□□□□ 0.86
PTPN3P26045 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN3P26045 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN3P26045 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN3P26045 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
PTPN3P26045 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PTPN3P26045 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN3P26045 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN3P26045 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN3P26045 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
PTPN3P26045 GPX1P1-201ENST00000388829 606 ntBASIC20.41■□□□□ 0.86
PTPN3P26045 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.41■□□□□ 0.86
PTPN3P26045 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.41■□□□□ 0.86
PTPN3P26045 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.41■□□□□ 0.86
PTPN3P26045 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
PTPN3P26045 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN3P26045 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN3P26045 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN3P26045 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN3P26045 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
PTPN3P26045 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN3P26045 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN3P26045 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN3P26045 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.41■□□□□ 0.86
PTPN3P26045 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
PTPN3P26045 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN3P26045 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN3P26045 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN3P26045 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN3P26045 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN3P26045 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.4■□□□□ 0.86
PTPN3P26045 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN3P26045 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN3P26045 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN3P26045 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PTPN3P26045 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN3P26045 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN3P26045 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN3P26045 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.4■□□□□ 0.86
PTPN3P26045 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.4■□□□□ 0.86
PTPN3P26045 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.4■□□□□ 0.86
PTPN3P26045 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.4■□□□□ 0.86
PTPN3P26045 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.4■□□□□ 0.86
PTPN3P26045 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.4■□□□□ 0.86
PTPN3P26045 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.4■□□□□ 0.86
PTPN3P26045 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.4■□□□□ 0.86
PTPN3P26045 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.4■□□□□ 0.86
PTPN3P26045 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN3P26045 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.4■□□□□ 0.86
PTPN3P26045 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN3P26045 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN3P26045 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
PTPN3P26045 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.39■□□□□ 0.86
PTPN3P26045 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PTPN3P26045 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
PTPN3P26045 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
PTPN3P26045 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPN3P26045 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
PTPN3P26045 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.39■□□□□ 0.85
PTPN3P26045 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPN3P26045 AC023632.3-201ENST00000521633 145 ntBASIC20.39■□□□□ 0.85
PTPN3P26045 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PTPN3P26045 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PTPN3P26045 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.39■□□□□ 0.85
PTPN3P26045 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.39■□□□□ 0.85
PTPN3P26045 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.39■□□□□ 0.85
PTPN3P26045 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms