Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPS4Y1P22090 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RPS4Y1P22090 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPS4Y1P22090 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPS4Y1P22090 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPS4Y1P22090 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.37■□□□□ 0.53
RPS4Y1P22090 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPS4Y1P22090 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPS4Y1P22090 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.37■□□□□ 0.53
RPS4Y1P22090 AC105036.2-201ENST00000569468 176 ntBASIC18.37■□□□□ 0.53
RPS4Y1P22090 MKRN4P-201ENST00000444706 1521 ntBASIC18.37■□□□□ 0.53
RPS4Y1P22090 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RPS4Y1P22090 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RPS4Y1P22090 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.37■□□□□ 0.53
RPS4Y1P22090 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.37■□□□□ 0.53
RPS4Y1P22090 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RPS4Y1P22090 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPS4Y1P22090 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RPS4Y1P22090 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.37■□□□□ 0.53
RPS4Y1P22090 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RPS4Y1P22090 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPS4Y1P22090 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPS4Y1P22090 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPS4Y1P22090 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPS4Y1P22090 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPS4Y1P22090 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPS4Y1P22090 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPS4Y1P22090 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
RPS4Y1P22090 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RPS4Y1P22090 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RPS4Y1P22090 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RPS4Y1P22090 LSM12P1-201ENST00000411836 588 ntBASIC18.36■□□□□ 0.53
RPS4Y1P22090 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RPS4Y1P22090 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.36■□□□□ 0.53
RPS4Y1P22090 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.36■□□□□ 0.53
RPS4Y1P22090 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RPS4Y1P22090 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.36■□□□□ 0.53
RPS4Y1P22090 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.36■□□□□ 0.53
RPS4Y1P22090 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.36■□□□□ 0.53
RPS4Y1P22090 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPS4Y1P22090 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPS4Y1P22090 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPS4Y1P22090 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPS4Y1P22090 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPS4Y1P22090 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPS4Y1P22090 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPS4Y1P22090 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPS4Y1P22090 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPS4Y1P22090 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPS4Y1P22090 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.35■□□□□ 0.53
RPS4Y1P22090 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPS4Y1P22090 HLA-G-202ENST00000376815 851 ntBASIC18.35■□□□□ 0.53
RPS4Y1P22090 HLA-G-203ENST00000376818 1127 ntBASIC18.35■□□□□ 0.53
RPS4Y1P22090 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.35■□□□□ 0.53
RPS4Y1P22090 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.35■□□□□ 0.53
RPS4Y1P22090 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPS4Y1P22090 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPS4Y1P22090 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.34■□□□□ 0.53
RPS4Y1P22090 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.34■□□□□ 0.53
RPS4Y1P22090 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPS4Y1P22090 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPS4Y1P22090 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPS4Y1P22090 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPS4Y1P22090 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.34■□□□□ 0.53
RPS4Y1P22090 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPS4Y1P22090 GPX1P1-201ENST00000388829 606 ntBASIC18.34■□□□□ 0.53
RPS4Y1P22090 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPS4Y1P22090 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RPS4Y1P22090 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPS4Y1P22090 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.34■□□□□ 0.53
RPS4Y1P22090 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.34■□□□□ 0.53
RPS4Y1P22090 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPS4Y1P22090 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.34■□□□□ 0.53
RPS4Y1P22090 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RPS4Y1P22090 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RPS4Y1P22090 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPS4Y1P22090 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPS4Y1P22090 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPS4Y1P22090 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.33■□□□□ 0.53
RPS4Y1P22090 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPS4Y1P22090 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
RPS4Y1P22090 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
RPS4Y1P22090 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.33■□□□□ 0.53
RPS4Y1P22090 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPS4Y1P22090 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RPS4Y1P22090 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPS4Y1P22090 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.33■□□□□ 0.52
RPS4Y1P22090 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.33■□□□□ 0.52
RPS4Y1P22090 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RPS4Y1P22090 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.33■□□□□ 0.52
RPS4Y1P22090 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
RPS4Y1P22090 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.33■□□□□ 0.52
RPS4Y1P22090 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.33■□□□□ 0.52
RPS4Y1P22090 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPS4Y1P22090 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.33■□□□□ 0.52
RPS4Y1P22090 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
RPS4Y1P22090 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPS4Y1P22090 TREX1-205ENST00000625293 1783 ntBASIC18.32■□□□□ 0.52
RPS4Y1P22090 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPS4Y1P22090 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms