Protein–RNA interactions for Protein: P0C2J1

TY1B-PR3, Transposon Ty1-PR3 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-PR3P0C2J1 YDR220CYDR220C 294 nt-0.83□□□□□ -2.54
TY1B-PR3P0C2J1 RPF1YHR088W 888 nt-0.84□□□□□ -2.54
TY1B-PR3P0C2J1 YIL066W-AYIL066W-A 444 nt-0.84□□□□□ -2.54
TY1B-PR3P0C2J1 TAR1YLR154W-C 375 nt-0.84□□□□□ -2.54
TY1B-PR3P0C2J1 ATG16YMR159C 453 nt-0.84□□□□□ -2.54
TY1B-PR3P0C2J1 COG6YNL041C 2520 nt-0.84□□□□□ -2.54
TY1B-PR3P0C2J1 IRC13YOR235W 315 nt-0.85□□□□□ -2.55
TY1B-PR3P0C2J1 RPS25BYLR333C 327 nt-0.85□□□□□ -2.55
TY1B-PR3P0C2J1 snR72snR72 98 nt-0.86□□□□□ -2.55
TY1B-PR3P0C2J1 YGL015CYGL015C 393 nt-0.86□□□□□ -2.55
TY1B-PR3P0C2J1 POP7YBR167C 423 nt-0.87□□□□□ -2.55
TY1B-PR3P0C2J1 YPT6YLR262C 648 nt-0.88□□□□□ -2.55
TY1B-PR3P0C2J1 YCR100CYCR100C 951 nt-0.88□□□□□ -2.55
TY1B-PR3P0C2J1 YJL020W-AYJL020W-A 258 nt-0.88□□□□□ -2.55
TY1B-PR3P0C2J1 EST1YLR233C 2100 nt-0.88□□□□□ -2.55
TY1B-PR3P0C2J1 YMR158W-BYMR158W-B 321 nt-0.88□□□□□ -2.55
TY1B-PR3P0C2J1 HMLALPHA2YCL067C 633 nt-0.9□□□□□ -2.55
TY1B-PR3P0C2J1 MATALPHA2YCR039C 633 nt-0.9□□□□□ -2.55
TY1B-PR3P0C2J1 HMRA2YCR096C 360 nt-0.9□□□□□ -2.55
TY1B-PR3P0C2J1 snR5snR5 204 nt-0.91□□□□□ -2.55
TY1B-PR3P0C2J1 YIL002W-AYIL002W-A 210 nt-0.91□□□□□ -2.55
TY1B-PR3P0C2J1 MRPL32YCR003W 552 nt-0.91□□□□□ -2.56
TY1B-PR3P0C2J1 PAU9YBL108C-A 129 nt-0.91□□□□□ -2.56
TY1B-PR3P0C2J1 SDH7YDR511W 402 nt-0.92□□□□□ -2.56
TY1B-PR3P0C2J1 YLR334CYLR334C 381 nt-0.92□□□□□ -2.56
TY1B-PR3P0C2J1 SGF11YPL047W 300 nt-0.92□□□□□ -2.56
TY1B-PR3P0C2J1 YER079WYER079W 633 nt-0.93□□□□□ -2.56
TY1B-PR3P0C2J1 AGA2YGL032C 264 nt-0.93□□□□□ -2.56
TY1B-PR3P0C2J1 snR161snR161 161 nt-0.93□□□□□ -2.56
TY1B-PR3P0C2J1 SNU13YEL026W 381 nt-0.93□□□□□ -2.56
TY1B-PR3P0C2J1 YML100W-AYML100W-A 174 nt-0.93□□□□□ -2.56
TY1B-PR3P0C2J1 YPR039WYPR039W 336 nt-0.93□□□□□ -2.56
TY1B-PR3P0C2J1 YGR270C-AYGR270C-A 219 nt-0.94□□□□□ -2.56
TY1B-PR3P0C2J1 YPL182CYPL182C 384 nt-0.95□□□□□ -2.56
TY1B-PR3P0C2J1 YBR072C-AYBR072C-A 162 nt-0.95□□□□□ -2.56
TY1B-PR3P0C2J1 YDL011CYDL011C 324 nt-0.96□□□□□ -2.56
TY1B-PR3P0C2J1 YLR282CYLR282C 342 nt-0.96□□□□□ -2.56
TY1B-PR3P0C2J1 YNL058CYNL058C 951 nt-0.96□□□□□ -2.56
TY1B-PR3P0C2J1 YPR092WYPR092W 306 nt-0.96□□□□□ -2.56
TY1B-PR3P0C2J1 APQ13YJL075C 417 nt-0.96□□□□□ -2.56
TY1B-PR3P0C2J1 YLR041WYLR041W 321 nt-0.96□□□□□ -2.56
TY1B-PR3P0C2J1 YML007C-AYML007C-A 111 nt-0.96□□□□□ -2.56
TY1B-PR3P0C2J1 TSC3YBR058C-A 243 nt-0.96□□□□□ -2.56
TY1B-PR3P0C2J1 CMC1YKL137W 336 nt-0.97□□□□□ -2.56
TY1B-PR3P0C2J1 YCR001WYCR001W 315 nt-0.98□□□□□ -2.57
TY1B-PR3P0C2J1 BLI1YKL061W 342 nt-0.98□□□□□ -2.57
TY1B-PR3P0C2J1 RPL22BYFL034C-A 369 nt-0.98□□□□□ -2.57
TY1B-PR3P0C2J1 AIM29YKR074W 468 nt-0.98□□□□□ -2.57
TY1B-PR3P0C2J1 YER135CYER135C 393 nt-0.99□□□□□ -2.57
TY1B-PR3P0C2J1 YLR217WYLR217W 324 nt-0.99□□□□□ -2.57
TY1B-PR3P0C2J1 YPR010C-AYPR010C-A 219 nt-0.99□□□□□ -2.57
TY1B-PR3P0C2J1 YGL230CYGL230C 444 nt-1□□□□□ -2.57
TY1B-PR3P0C2J1 YHR007C-AYHR007C-A 216 nt-1□□□□□ -2.57
TY1B-PR3P0C2J1 YDL007C-AYDL007C-A 258 nt-1.01□□□□□ -2.57
TY1B-PR3P0C2J1 YDR366CYDR366C 399 nt-1.01□□□□□ -2.57
TY1B-PR3P0C2J1 YMR254CYMR254C 309 nt-1.01□□□□□ -2.57
TY1B-PR3P0C2J1 YGR025WYGR025W 303 nt-1.01□□□□□ -2.57
TY1B-PR3P0C2J1 CUP1-1YHR053C 186 nt-1.02□□□□□ -2.57
TY1B-PR3P0C2J1 CUP1-2YHR055C 186 nt-1.02□□□□□ -2.57
TY1B-PR3P0C2J1 YGL123C-AYGL123C-A 231 nt-1.03□□□□□ -2.58
TY1B-PR3P0C2J1 FYV7YLR068W 456 nt-1.03□□□□□ -2.58
TY1B-PR3P0C2J1 YPL068CYPL068C 882 nt-1.03□□□□□ -2.58
TY1B-PR3P0C2J1 YER175W-AYER175W-A 165 nt-1.04□□□□□ -2.58
TY1B-PR3P0C2J1 MND1YGL183C 660 nt-1.06□□□□□ -2.58
TY1B-PR3P0C2J1 YHR130CYHR130C 336 nt-1.06□□□□□ -2.58
TY1B-PR3P0C2J1 YNL303WYNL303W 348 nt-1.06□□□□□ -2.58
TY1B-PR3P0C2J1 YDR426CYDR426C 378 nt-1.06□□□□□ -2.58
TY1B-PR3P0C2J1 YKL083WYKL083W 615 nt-1.06□□□□□ -2.58
TY1B-PR3P0C2J1 YPR002C-AYPR002C-A 198 nt-1.07□□□□□ -2.58
TY1B-PR3P0C2J1 ZEO1YOL109W 342 nt-1.08□□□□□ -2.58
TY1B-PR3P0C2J1 SDH6YDR379C-A 240 nt-1.08□□□□□ -2.58
TY1B-PR3P0C2J1 YAR029WYAR029W 225 nt-1.08□□□□□ -2.58
TY1B-PR3P0C2J1 YGL182CYGL182C 324 nt-1.09□□□□□ -2.58
TY1B-PR3P0C2J1 APQ12YIL040W 417 nt-1.1□□□□□ -2.59
TY1B-PR3P0C2J1 YBL071CYBL071C 309 nt-1.1□□□□□ -2.59
TY1B-PR3P0C2J1 YER084W-AYER084W-A 513 nt-1.11□□□□□ -2.59
TY1B-PR3P0C2J1 snR9snR9 187 nt-1.11□□□□□ -2.59
TY1B-PR3P0C2J1 YIL032CYIL032C 357 nt-1.11□□□□□ -2.59
TY1B-PR3P0C2J1 YKL100W-AYKL100W-A 90 nt-1.12□□□□□ -2.59
TY1B-PR3P0C2J1 YIR021W-AYIR021W-A 213 nt-1.13□□□□□ -2.59
TY1B-PR3P0C2J1 YLR264C-AYLR264C-A 117 nt-1.13□□□□□ -2.59
TY1B-PR3P0C2J1 YDR354C-AYDR354C-A 144 nt-1.14□□□□□ -2.59
TY1B-PR3P0C2J1 YLR154W-FYLR154W-F 141 nt-1.15□□□□□ -2.59
TY1B-PR3P0C2J1 YOR015WYOR015W 360 nt-1.15□□□□□ -2.59
TY1B-PR3P0C2J1 YOR192C-CYOR192C-C 237 nt-1.16□□□□□ -2.59
TY1B-PR3P0C2J1 YKL044WYKL044W 321 nt-1.16□□□□□ -2.6
TY1B-PR3P0C2J1 YBL062WYBL062W 381 nt-1.16□□□□□ -2.6
TY1B-PR3P0C2J1 YPL229WYPL229W 621 nt-1.16□□□□□ -2.6
TY1B-PR3P0C2J1 SCEIQ0160 708 nt-1.19□□□□□ -2.6
TY1B-PR3P0C2J1 snR49snR49 165 nt-1.19□□□□□ -2.6
TY1B-PR3P0C2J1 YJL182CYJL182C 318 nt-1.19□□□□□ -2.6
TY1B-PR3P0C2J1 YJR087WYJR087W 351 nt-1.22□□□□□ -2.6
TY1B-PR3P0C2J1 YOR161W-AYOR161W-A 81 nt-1.23□□□□□ -2.61
TY1B-PR3P0C2J1 YER053C-AYER053C-A 114 nt-1.25□□□□□ -2.61
TY1B-PR3P0C2J1 YFL012WYFL012W 447 nt-1.25□□□□□ -2.61
TY1B-PR3P0C2J1 YLR456WYLR456W 615 nt-1.26□□□□□ -2.61
TY1B-PR3P0C2J1 CBS1YDL069C 690 nt-1.26□□□□□ -2.61
TY1B-PR3P0C2J1 YEL020C-BYEL020C-B 198 nt-1.26□□□□□ -2.61
TY1B-PR3P0C2J1 YFL063WYFL063W 456 nt-1.26□□□□□ -2.61
TY1B-PR3P0C2J1 YFR009W-AYFR009W-A 258 nt-1.26□□□□□ -2.61
Retrieved 100 of 7,029 protein–RNA pairs in 23.1 ms