Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC25.65■■□□□ 1.7
SNRPA1P09661 LINC01023-201ENST00000606054 436 ntBASIC25.65■■□□□ 1.7
SNRPA1P09661 CD177P1-201ENST00000606252 935 ntBASIC25.65■■□□□ 1.7
SNRPA1P09661 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC25.65■■□□□ 1.7
SNRPA1P09661 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC25.65■■□□□ 1.7
SNRPA1P09661 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
SNRPA1P09661 AC007225.1-201ENST00000566331 1836 ntBASIC25.65■■□□□ 1.7
SNRPA1P09661 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SNRPA1P09661 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SNRPA1P09661 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC25.64■■□□□ 1.7
SNRPA1P09661 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
SNRPA1P09661 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
SNRPA1P09661 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC25.64■■□□□ 1.7
SNRPA1P09661 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC25.64■■□□□ 1.7
SNRPA1P09661 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.69
SNRPA1P09661 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
SNRPA1P09661 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
SNRPA1P09661 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC25.64■■□□□ 1.69
SNRPA1P09661 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC25.64■■□□□ 1.69
SNRPA1P09661 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
SNRPA1P09661 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SNRPA1P09661 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SNRPA1P09661 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
SNRPA1P09661 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SNRPA1P09661 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SNRPA1P09661 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC25.63■■□□□ 1.69
SNRPA1P09661 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SNRPA1P09661 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC25.63■■□□□ 1.69
SNRPA1P09661 AP003071.4-201ENST00000562276 1284 ntBASIC25.63■■□□□ 1.69
SNRPA1P09661 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC25.63■■□□□ 1.69
SNRPA1P09661 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
SNRPA1P09661 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SNRPA1P09661 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
SNRPA1P09661 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SNRPA1P09661 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC25.63■■□□□ 1.69
SNRPA1P09661 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SNRPA1P09661 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
SNRPA1P09661 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC25.63■■□□□ 1.69
SNRPA1P09661 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC25.62■■□□□ 1.69
SNRPA1P09661 DPP3P2-201ENST00000416030 1696 ntBASIC25.62■■□□□ 1.69
SNRPA1P09661 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
SNRPA1P09661 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC25.62■■□□□ 1.69
SNRPA1P09661 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC25.62■■□□□ 1.69
SNRPA1P09661 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
SNRPA1P09661 CALM3-202ENST00000391918 702 ntTSL 2 BASIC25.62■■□□□ 1.69
SNRPA1P09661 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
SNRPA1P09661 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC25.62■■□□□ 1.69
SNRPA1P09661 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SNRPA1P09661 AC073195.1-201ENST00000607241 877 ntBASIC25.62■■□□□ 1.69
SNRPA1P09661 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC25.62■■□□□ 1.69
SNRPA1P09661 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SNRPA1P09661 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SNRPA1P09661 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SNRPA1P09661 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
SNRPA1P09661 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC25.61■■□□□ 1.69
SNRPA1P09661 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SNRPA1P09661 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SNRPA1P09661 AC087499.1-201ENST00000418141 1075 ntBASIC25.61■■□□□ 1.69
SNRPA1P09661 FAM197Y1-201ENST00000421178 764 ntBASIC25.61■■□□□ 1.69
SNRPA1P09661 AL355355.2-201ENST00000442321 338 ntBASIC25.61■■□□□ 1.69
SNRPA1P09661 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
SNRPA1P09661 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC25.61■■□□□ 1.69
SNRPA1P09661 AL353708.3-201ENST00000610272 989 ntBASIC25.61■■□□□ 1.69
SNRPA1P09661 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC25.61■■□□□ 1.69
SNRPA1P09661 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SNRPA1P09661 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
SNRPA1P09661 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC25.61■■□□□ 1.69
SNRPA1P09661 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
SNRPA1P09661 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
SNRPA1P09661 SRI-203ENST00000419179 1307 ntTSL 2 BASIC25.61■■□□□ 1.69
SNRPA1P09661 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
SNRPA1P09661 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SNRPA1P09661 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC25.6■■□□□ 1.69
SNRPA1P09661 BID-203ENST00000399765 1879 ntTSL 2 BASIC25.6■■□□□ 1.69
SNRPA1P09661 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SNRPA1P09661 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SNRPA1P09661 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC25.6■■□□□ 1.69
SNRPA1P09661 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SNRPA1P09661 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC25.59■■□□□ 1.69
SNRPA1P09661 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SNRPA1P09661 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SNRPA1P09661 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC25.59■■□□□ 1.69
SNRPA1P09661 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SNRPA1P09661 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SNRPA1P09661 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
SNRPA1P09661 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC25.59■■□□□ 1.69
SNRPA1P09661 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SNRPA1P09661 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC25.59■■□□□ 1.69
SNRPA1P09661 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC25.59■■□□□ 1.69
SNRPA1P09661 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC25.59■■□□□ 1.69
SNRPA1P09661 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC25.59■■□□□ 1.69
SNRPA1P09661 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC25.59■■□□□ 1.69
SNRPA1P09661 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SNRPA1P09661 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC25.59■■□□□ 1.69
SNRPA1P09661 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
SNRPA1P09661 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SNRPA1P09661 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SNRPA1P09661 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SNRPA1P09661 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC25.58■■□□□ 1.69
SNRPA1P09661 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms