Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
APOA4P06727 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
APOA4P06727 AC006970.2-201ENST00000450065 779 ntBASIC20.06■□□□□ 0.8
APOA4P06727 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
APOA4P06727 AC087633.2-202ENST00000565166 1439 ntBASIC20.06■□□□□ 0.8
APOA4P06727 AC133552.2-202ENST00000575694 574 ntBASIC20.06■□□□□ 0.8
APOA4P06727 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.06■□□□□ 0.8
APOA4P06727 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.06■□□□□ 0.8
APOA4P06727 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.06■□□□□ 0.8
APOA4P06727 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
APOA4P06727 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
APOA4P06727 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
APOA4P06727 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
APOA4P06727 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
APOA4P06727 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
APOA4P06727 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
APOA4P06727 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
APOA4P06727 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
APOA4P06727 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.05■□□□□ 0.8
APOA4P06727 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.05■□□□□ 0.8
APOA4P06727 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
APOA4P06727 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.05■□□□□ 0.8
APOA4P06727 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
APOA4P06727 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APOA4P06727 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.05■□□□□ 0.8
APOA4P06727 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APOA4P06727 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APOA4P06727 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APOA4P06727 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.05■□□□□ 0.8
APOA4P06727 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.05■□□□□ 0.8
APOA4P06727 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.05■□□□□ 0.8
APOA4P06727 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.05■□□□□ 0.8
APOA4P06727 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
APOA4P06727 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
APOA4P06727 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
APOA4P06727 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.05■□□□□ 0.8
APOA4P06727 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APOA4P06727 SMG8-203ENST00000578922 2178 ntBASIC20.05■□□□□ 0.8
APOA4P06727 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
APOA4P06727 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
APOA4P06727 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APOA4P06727 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
APOA4P06727 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APOA4P06727 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APOA4P06727 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APOA4P06727 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.05■□□□□ 0.8
APOA4P06727 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
APOA4P06727 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.05■□□□□ 0.8
APOA4P06727 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
APOA4P06727 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
APOA4P06727 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APOA4P06727 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APOA4P06727 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
APOA4P06727 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APOA4P06727 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APOA4P06727 AL512625.2-201ENST00000417533 625 ntBASIC20.04■□□□□ 0.8
APOA4P06727 CROCCP5-201ENST00000436658 830 ntBASIC20.04■□□□□ 0.8
APOA4P06727 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APOA4P06727 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.04■□□□□ 0.8
APOA4P06727 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
APOA4P06727 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.04■□□□□ 0.8
APOA4P06727 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
APOA4P06727 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.04■□□□□ 0.8
APOA4P06727 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.04■□□□□ 0.8
APOA4P06727 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
APOA4P06727 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
APOA4P06727 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
APOA4P06727 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
APOA4P06727 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
APOA4P06727 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
APOA4P06727 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.03■□□□□ 0.8
APOA4P06727 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.03■□□□□ 0.8
APOA4P06727 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
APOA4P06727 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
APOA4P06727 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
APOA4P06727 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.03■□□□□ 0.8
APOA4P06727 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.03■□□□□ 0.8
APOA4P06727 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.03■□□□□ 0.8
APOA4P06727 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.03■□□□□ 0.8
APOA4P06727 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
APOA4P06727 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
APOA4P06727 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.03■□□□□ 0.8
APOA4P06727 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.03■□□□□ 0.8
APOA4P06727 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
APOA4P06727 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
APOA4P06727 KRT8P36-201ENST00000489121 1440 ntBASIC20.02■□□□□ 0.8
APOA4P06727 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
APOA4P06727 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
APOA4P06727 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
APOA4P06727 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
APOA4P06727 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
APOA4P06727 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.02■□□□□ 0.8
APOA4P06727 AF201337.1-201ENST00000520239 748 ntBASIC20.02■□□□□ 0.8
APOA4P06727 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.02■□□□□ 0.8
APOA4P06727 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
APOA4P06727 AL356652.1-201ENST00000615962 565 ntBASIC20.02■□□□□ 0.8
APOA4P06727 AL050303.2-201ENST00000619798 666 ntBASIC20.02■□□□□ 0.8
APOA4P06727 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
APOA4P06727 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
APOA4P06727 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms