Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
P04436 RPPH1-201ENST00000516869 333 ntBASIC18.32■□□□□ 0.52
P04436 PRKY-204ENST00000533551 1019 ntBASIC18.32■□□□□ 0.52
P04436 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.32■□□□□ 0.52
P04436 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.32■□□□□ 0.52
P04436 AL359736.2-201ENST00000621992 437 ntBASIC18.32■□□□□ 0.52
P04436 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
P04436 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.32■□□□□ 0.52
P04436 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
P04436 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
P04436 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.32■□□□□ 0.52
P04436 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
P04436 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
P04436 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P04436 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
P04436 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P04436 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
P04436 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
P04436 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
P04436 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
P04436 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P04436 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.31■□□□□ 0.52
P04436 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.31■□□□□ 0.52
P04436 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
P04436 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.31■□□□□ 0.52
P04436 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.31■□□□□ 0.52
P04436 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.31■□□□□ 0.52
P04436 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
P04436 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P04436 KRT8P17-201ENST00000453110 1448 ntBASIC18.31■□□□□ 0.52
P04436 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
P04436 PTBP1P-201ENST00000554374 1601 ntBASIC18.31■□□□□ 0.52
P04436 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
P04436 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P04436 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.3■□□□□ 0.52
P04436 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
P04436 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.3■□□□□ 0.52
P04436 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P04436 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
P04436 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
P04436 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.3■□□□□ 0.52
P04436 UBE2SP1-201ENST00000450587 669 ntBASIC18.3■□□□□ 0.52
P04436 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.3■□□□□ 0.52
P04436 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
P04436 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.3■□□□□ 0.52
P04436 MTDHP1-201ENST00000605323 784 ntBASIC18.3■□□□□ 0.52
P04436 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.3■□□□□ 0.52
P04436 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
P04436 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
P04436 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.3■□□□□ 0.52
P04436 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
P04436 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.3■□□□□ 0.52
P04436 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.3■□□□□ 0.52
P04436 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.3■□□□□ 0.52
P04436 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.29■□□□□ 0.52
P04436 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.29■□□□□ 0.52
P04436 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
P04436 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
P04436 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
P04436 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
P04436 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.29■□□□□ 0.52
P04436 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
P04436 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
P04436 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
P04436 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.29■□□□□ 0.52
P04436 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.29■□□□□ 0.52
P04436 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
P04436 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.29■□□□□ 0.52
P04436 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
P04436 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
P04436 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.29■□□□□ 0.52
P04436 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
P04436 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
P04436 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.28■□□□□ 0.52
P04436 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
P04436 AL137060.1-201ENST00000618151 2648 ntBASIC18.28■□□□□ 0.52
P04436 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
P04436 AC239809.2-201ENST00000415381 517 ntBASIC18.28■□□□□ 0.52
P04436 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.28■□□□□ 0.52
P04436 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.28■□□□□ 0.52
P04436 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.28■□□□□ 0.52
P04436 AC093827.2-201ENST00000512654 315 ntBASIC18.28■□□□□ 0.52
P04436 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
P04436 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.28■□□□□ 0.52
P04436 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.28■□□□□ 0.52
P04436 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.28■□□□□ 0.52
P04436 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P04436 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P04436 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
P04436 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
P04436 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.28■□□□□ 0.52
P04436 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P04436 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
P04436 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
P04436 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
P04436 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P04436 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
P04436 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
P04436 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
P04436 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms