Protein–RNA interactions for Protein: P04003

C4BPA, C4b-binding protein alpha chain, humanhuman

Known RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4BPAP04003 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
C4BPAP04003 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.57■■□□□ 1.04
C4BPAP04003 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
C4BPAP04003 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
C4BPAP04003 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
C4BPAP04003 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.57■■□□□ 1.04
C4BPAP04003 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
C4BPAP04003 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.56■■□□□ 1.04
C4BPAP04003 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
C4BPAP04003 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
C4BPAP04003 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.56■■□□□ 1.04
C4BPAP04003 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.56■■□□□ 1.04
C4BPAP04003 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
C4BPAP04003 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
C4BPAP04003 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
C4BPAP04003 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
C4BPAP04003 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
C4BPAP04003 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
C4BPAP04003 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.56■■□□□ 1.04
C4BPAP04003 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
C4BPAP04003 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.56■■□□□ 1.04
C4BPAP04003 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.56■■□□□ 1.04
C4BPAP04003 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
C4BPAP04003 AL691432.2-201ENST00000607222 2038 ntBASIC21.56■■□□□ 1.04
C4BPAP04003 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
C4BPAP04003 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
C4BPAP04003 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
C4BPAP04003 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.55■■□□□ 1.04
C4BPAP04003 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
C4BPAP04003 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
C4BPAP04003 TCF3P1-201ENST00000423021 1937 ntBASIC21.55■■□□□ 1.04
C4BPAP04003 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
C4BPAP04003 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.55■■□□□ 1.04
C4BPAP04003 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
C4BPAP04003 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.55■■□□□ 1.04
C4BPAP04003 AL390719.1-204ENST00000412397 1219 ntBASIC21.55■■□□□ 1.04
C4BPAP04003 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
C4BPAP04003 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.55■■□□□ 1.04
C4BPAP04003 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
C4BPAP04003 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
C4BPAP04003 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
C4BPAP04003 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.55■■□□□ 1.04
C4BPAP04003 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
C4BPAP04003 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.55■■□□□ 1.04
C4BPAP04003 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
C4BPAP04003 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
C4BPAP04003 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
C4BPAP04003 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
C4BPAP04003 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
C4BPAP04003 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
C4BPAP04003 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
C4BPAP04003 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.54■■□□□ 1.04
C4BPAP04003 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
C4BPAP04003 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
C4BPAP04003 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
C4BPAP04003 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.54■■□□□ 1.04
C4BPAP04003 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.54■■□□□ 1.04
C4BPAP04003 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.54■■□□□ 1.04
C4BPAP04003 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
C4BPAP04003 RNA5SP413-201ENST00000516373 109 ntBASIC21.54■■□□□ 1.04
C4BPAP04003 UNC93B5-201ENST00000530315 699 ntBASIC21.54■■□□□ 1.04
C4BPAP04003 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.54■■□□□ 1.04
C4BPAP04003 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.54■■□□□ 1.04
C4BPAP04003 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.54■■□□□ 1.04
C4BPAP04003 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.54■■□□□ 1.04
C4BPAP04003 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
C4BPAP04003 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
C4BPAP04003 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
C4BPAP04003 KRT16P6-202ENST00000425692 1426 ntBASIC21.54■■□□□ 1.04
C4BPAP04003 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
C4BPAP04003 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
C4BPAP04003 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
C4BPAP04003 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
C4BPAP04003 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
C4BPAP04003 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
C4BPAP04003 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.53■■□□□ 1.04
C4BPAP04003 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
C4BPAP04003 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.53■■□□□ 1.04
C4BPAP04003 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.53■■□□□ 1.04
C4BPAP04003 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
C4BPAP04003 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
C4BPAP04003 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
C4BPAP04003 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
C4BPAP04003 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
C4BPAP04003 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.52■■□□□ 1.04
C4BPAP04003 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.52■■□□□ 1.04
C4BPAP04003 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
C4BPAP04003 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.52■■□□□ 1.04
C4BPAP04003 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
C4BPAP04003 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.52■■□□□ 1.04
C4BPAP04003 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.52■■□□□ 1.04
C4BPAP04003 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
C4BPAP04003 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.52■■□□□ 1.04
C4BPAP04003 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.52■■□□□ 1.04
C4BPAP04003 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.52■■□□□ 1.04
C4BPAP04003 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.52■■□□□ 1.04
C4BPAP04003 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.52■■□□□ 1.04
C4BPAP04003 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.52■■□□□ 1.04
C4BPAP04003 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
C4BPAP04003 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms