Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MT-ND3P03897 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MT-ND3P03897 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.35■□□□□ 0.85
MT-ND3P03897 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MT-ND3P03897 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MT-ND3P03897 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.35■□□□□ 0.85
MT-ND3P03897 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.34■□□□□ 0.85
MT-ND3P03897 AL158211.5-201ENST00000623583 2518 ntBASIC20.34■□□□□ 0.85
MT-ND3P03897 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
MT-ND3P03897 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MT-ND3P03897 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MT-ND3P03897 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MT-ND3P03897 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.34■□□□□ 0.85
MT-ND3P03897 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.34■□□□□ 0.85
MT-ND3P03897 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
MT-ND3P03897 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
MT-ND3P03897 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.34■□□□□ 0.85
MT-ND3P03897 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
MT-ND3P03897 KRT16P2-201ENST00000414673 1423 ntBASIC20.34■□□□□ 0.85
MT-ND3P03897 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.34■□□□□ 0.85
MT-ND3P03897 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MT-ND3P03897 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.34■□□□□ 0.85
MT-ND3P03897 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
MT-ND3P03897 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MT-ND3P03897 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MT-ND3P03897 AC116050.2-201ENST00000612102 1779 ntBASIC20.34■□□□□ 0.85
MT-ND3P03897 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
MT-ND3P03897 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
MT-ND3P03897 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
MT-ND3P03897 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MT-ND3P03897 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.33■□□□□ 0.85
MT-ND3P03897 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
MT-ND3P03897 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MT-ND3P03897 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
MT-ND3P03897 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MT-ND3P03897 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
MT-ND3P03897 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
MT-ND3P03897 AC120498.10-201ENST00000621827 505 ntBASIC20.33■□□□□ 0.85
MT-ND3P03897 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MT-ND3P03897 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
MT-ND3P03897 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MT-ND3P03897 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.32■□□□□ 0.84
MT-ND3P03897 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MT-ND3P03897 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MT-ND3P03897 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MT-ND3P03897 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.32■□□□□ 0.84
MT-ND3P03897 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
MT-ND3P03897 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MT-ND3P03897 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.32■□□□□ 0.84
MT-ND3P03897 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.32■□□□□ 0.84
MT-ND3P03897 AC231657.2-201ENST00000624556 255 ntBASIC20.32■□□□□ 0.84
MT-ND3P03897 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MT-ND3P03897 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
MT-ND3P03897 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.32■□□□□ 0.84
MT-ND3P03897 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
MT-ND3P03897 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MT-ND3P03897 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
MT-ND3P03897 AC018445.3-201ENST00000624177 1945 ntBASIC20.31■□□□□ 0.84
MT-ND3P03897 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
MT-ND3P03897 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MT-ND3P03897 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
MT-ND3P03897 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
MT-ND3P03897 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MT-ND3P03897 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
MT-ND3P03897 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MT-ND3P03897 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MT-ND3P03897 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.31■□□□□ 0.84
MT-ND3P03897 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.31■□□□□ 0.84
MT-ND3P03897 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MT-ND3P03897 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MT-ND3P03897 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
MT-ND3P03897 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
MT-ND3P03897 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
MT-ND3P03897 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
MT-ND3P03897 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
MT-ND3P03897 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
MT-ND3P03897 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MT-ND3P03897 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
MT-ND3P03897 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MT-ND3P03897 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
MT-ND3P03897 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MT-ND3P03897 CROCCP5-201ENST00000436658 830 ntBASIC20.3■□□□□ 0.84
MT-ND3P03897 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.3■□□□□ 0.84
MT-ND3P03897 AC138907.5-202ENST00000569484 235 ntBASIC20.3■□□□□ 0.84
MT-ND3P03897 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
MT-ND3P03897 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MT-ND3P03897 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MT-ND3P03897 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.3■□□□□ 0.84
MT-ND3P03897 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.3■□□□□ 0.84
MT-ND3P03897 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
MT-ND3P03897 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MT-ND3P03897 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.3■□□□□ 0.84
MT-ND3P03897 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
MT-ND3P03897 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.3■□□□□ 0.84
MT-ND3P03897 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.3■□□□□ 0.84
MT-ND3P03897 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
MT-ND3P03897 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MT-ND3P03897 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MT-ND3P03897 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MT-ND3P03897 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms