Protein–RNA interactions for Protein: P00560

PGK1, Phosphoglycerate kinase, yeastyeast

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PGK1P00560 ALK1YGL021W 2283 nt1.76□□□□□ -2.13
PGK1P00560 SYH1YPL105C 2550 nt1.75□□□□□ -2.13
PGK1P00560 HMI1YOL095C 2121 nt1.75□□□□□ -2.13
PGK1P00560 YDR544CYDR544C 429 nt1.75□□□□□ -2.13
PGK1P00560 PKH3YDR466W 2697 nt1.75□□□□□ -2.13
PGK1P00560 YLR035C-AYLR035C-A 3468 nt1.75□□□□□ -2.13
PGK1P00560 PTP2YOR208W 2253 nt1.74□□□□□ -2.13
PGK1P00560 COX12YLR038C 252 nt1.74□□□□□ -2.13
PGK1P00560 VPS15YBR097W 4365 nt1.74□□□□□ -2.13
PGK1P00560 CTF4YPR135W 2784 nt1.74□□□□□ -2.13
PGK1P00560 IFH1YLR223C 3258 nt1.73□□□□□ -2.13
PGK1P00560 CHS1YNL192W 3396 nt1.73□□□□□ -2.13
PGK1P00560 PMP2YEL017C-A 132 nt1.73□□□□□ -2.13
PGK1P00560 YFR012W-AYFR012W-A 87 nt1.73□□□□□ -2.13
PGK1P00560 tL(UAA)QtL(UAA)Q 85 nt1.73□□□□□ -2.13
PGK1P00560 YNL103W-AYNL103W-A 90 nt1.73□□□□□ -2.13
PGK1P00560 HIR3YJR140C 4947 nt1.73□□□□□ -2.13
PGK1P00560 PAA1YDR071C 576 nt1.71□□□□□ -2.14
PGK1P00560 YJL026C-AYJL026C-A 222 nt1.71□□□□□ -2.14
PGK1P00560 YMR175W-AYMR175W-A 195 nt1.71□□□□□ -2.14
PGK1P00560 YMR326CYMR326C 309 nt1.71□□□□□ -2.14
PGK1P00560 PKH2YOL100W 3246 nt1.7□□□□□ -2.14
PGK1P00560 YNL144CYNL144C 2223 nt1.7□□□□□ -2.14
PGK1P00560 YCR087C-AYCR087C-A 462 nt1.7□□□□□ -2.14
PGK1P00560 YBR099CYBR099C 384 nt1.7□□□□□ -2.14
PGK1P00560 COG4YPR105C 2586 nt1.7□□□□□ -2.14
PGK1P00560 SEY1YOR165W 2331 nt1.69□□□□□ -2.14
PGK1P00560 YCR095W-AYCR095W-A 159 nt1.68□□□□□ -2.14
PGK1P00560 NUP157YER105C 4176 nt1.68□□□□□ -2.14
PGK1P00560 MSH3YCR092C 3057 nt1.68□□□□□ -2.14
PGK1P00560 SAC3YDR159W 3906 nt1.68□□□□□ -2.14
PGK1P00560 CTR9YOL145C 3234 nt1.67□□□□□ -2.14
PGK1P00560 YLL054CYLL054C 2532 nt1.67□□□□□ -2.14
PGK1P00560 CMC4YMR194C-B 222 nt1.66□□□□□ -2.14
PGK1P00560 YOR019WYOR019W 2193 nt1.66□□□□□ -2.14
PGK1P00560 IRE1YHR079C 3348 nt1.66□□□□□ -2.14
PGK1P00560 PRP5YBR237W 2550 nt1.65□□□□□ -2.14
PGK1P00560 SLI15YBR156C 2097 nt1.65□□□□□ -2.14
PGK1P00560 TTI1YKL033W 3117 nt1.64□□□□□ -2.15
PGK1P00560 YHR217CYHR217C 462 nt1.64□□□□□ -2.15
PGK1P00560 YIL002W-AYIL002W-A 210 nt1.64□□□□□ -2.15
PGK1P00560 MSH6YDR097C 3729 nt1.64□□□□□ -2.15
PGK1P00560 IRA1YBR140C 9279 nt1.64□□□□□ -2.15
PGK1P00560 OST4YDL232W 111 nt1.62□□□□□ -2.15
PGK1P00560 FRK1YPL141C 2598 nt1.62□□□□□ -2.15
PGK1P00560 APL1YJR005W 2103 nt1.61□□□□□ -2.15
PGK1P00560 YNL211CYNL211C 261 nt1.6□□□□□ -2.15
PGK1P00560 SEC63YOR254C 1992 nt1.59□□□□□ -2.15
PGK1P00560 CHS6YJL099W 2241 nt1.59□□□□□ -2.15
PGK1P00560 snR61snR61 90 nt1.59□□□□□ -2.15
PGK1P00560 SPO24YPR036W-A 204 nt1.59□□□□□ -2.15
PGK1P00560 FIG2YCR089W 4830 nt1.59□□□□□ -2.16
PGK1P00560 ADR1YDR216W 3972 nt1.58□□□□□ -2.16
PGK1P00560 TDA9YML081W 3756 nt1.58□□□□□ -2.16
PGK1P00560 YGL182CYGL182C 324 nt1.58□□□□□ -2.16
PGK1P00560 YDL206WYDL206W 2289 nt1.57□□□□□ -2.16
PGK1P00560 YJR039WYJR039W 3366 nt1.57□□□□□ -2.16
PGK1P00560 YDL247W-AYDL247W-A 75 nt1.57□□□□□ -2.16
PGK1P00560 SOM1YEL059C-A 225 nt1.57□□□□□ -2.16
PGK1P00560 YAL067W-AYAL067W-A 228 nt1.57□□□□□ -2.16
PGK1P00560 LAA1YJL207C 6045 nt1.56□□□□□ -2.16
PGK1P00560 YLR282CYLR282C 342 nt1.56□□□□□ -2.16
PGK1P00560 YNL067W-BYNL067W-B 141 nt1.56□□□□□ -2.16
PGK1P00560 YOR161W-AYOR161W-A 81 nt1.56□□□□□ -2.16
PGK1P00560 STB6YKL072W 2301 nt1.56□□□□□ -2.16
PGK1P00560 YGL123C-AYGL123C-A 231 nt1.55□□□□□ -2.16
PGK1P00560 UFD2YDL190C 2886 nt1.54□□□□□ -2.16
PGK1P00560 RAD50YNL250W 3939 nt1.54□□□□□ -2.16
PGK1P00560 SPC110YDR356W 2835 nt1.54□□□□□ -2.16
PGK1P00560 PET127YOR017W 2403 nt1.54□□□□□ -2.16
PGK1P00560 MON2YNL297C 4911 nt1.53□□□□□ -2.16
PGK1P00560 FYV8YGR196C 2454 nt1.53□□□□□ -2.16
PGK1P00560 snR39BsnR39B 96 nt1.53□□□□□ -2.16
PGK1P00560 BFR2YDR299W 1605 nt1.52□□□□□ -2.17
PGK1P00560 QCR9YGR183C 201 nt1.52□□□□□ -2.17
PGK1P00560 YBL039C-AYBL039C-A 84 nt1.52□□□□□ -2.17
PGK1P00560 snR14snR14 160 nt1.52□□□□□ -2.17
PGK1P00560 UTP8YGR128C 2142 nt1.52□□□□□ -2.17
PGK1P00560 POL5YEL055C 3069 nt1.52□□□□□ -2.17
PGK1P00560 YGR130CYGR130C 2451 nt1.51□□□□□ -2.17
PGK1P00560 YGL041C-BYGL041C-B 183 nt1.51□□□□□ -2.17
PGK1P00560 tQ(UUG)E2tQ(UUG)E2 72 nt1.51□□□□□ -2.17
PGK1P00560 YHR131W-AYHR131W-A 246 nt1.51□□□□□ -2.17
PGK1P00560 CCH1YGR217W 6120 nt1.51□□□□□ -2.17
PGK1P00560 SMC4YLR086W 4257 nt1.5□□□□□ -2.17
PGK1P00560 NUT1YGL151W 3399 nt1.5□□□□□ -2.17
PGK1P00560 SSK2YNR031C 4740 nt1.49□□□□□ -2.17
PGK1P00560 PMD1YER132C 5262 nt1.49□□□□□ -2.17
PGK1P00560 EAF1YDR359C 2949 nt1.49□□□□□ -2.17
PGK1P00560 tH(GUG)E1tH(GUG)E1 72 nt1.49□□□□□ -2.17
PGK1P00560 tH(GUG)E2tH(GUG)E2 72 nt1.49□□□□□ -2.17
PGK1P00560 tH(GUG)G1tH(GUG)G1 72 nt1.49□□□□□ -2.17
PGK1P00560 tH(GUG)G2tH(GUG)G2 72 nt1.49□□□□□ -2.17
PGK1P00560 tH(GUG)HtH(GUG)H 72 nt1.49□□□□□ -2.17
PGK1P00560 tH(GUG)KtH(GUG)K 72 nt1.49□□□□□ -2.17
PGK1P00560 tH(GUG)MtH(GUG)M 72 nt1.49□□□□□ -2.17
PGK1P00560 YLL020CYLL020C 306 nt1.49□□□□□ -2.17
PGK1P00560 SLX4YLR135W 2247 nt1.47□□□□□ -2.17
PGK1P00560 TAH1YCR060W 336 nt1.47□□□□□ -2.17
PGK1P00560 SBH1YER087C-B 249 nt1.47□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 18.5 ms