Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GPC4O75487 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GPC4O75487 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
GPC4O75487 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GPC4O75487 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GPC4O75487 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
GPC4O75487 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
GPC4O75487 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
GPC4O75487 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.02■□□□□ 0.8
GPC4O75487 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.02■□□□□ 0.8
GPC4O75487 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.02■□□□□ 0.8
GPC4O75487 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.02■□□□□ 0.8
GPC4O75487 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.02■□□□□ 0.8
GPC4O75487 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.02■□□□□ 0.8
GPC4O75487 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
GPC4O75487 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GPC4O75487 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GPC4O75487 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.02■□□□□ 0.8
GPC4O75487 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
GPC4O75487 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GPC4O75487 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
GPC4O75487 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.02■□□□□ 0.79
GPC4O75487 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.79
GPC4O75487 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
GPC4O75487 KRT8P36-201ENST00000489121 1440 ntBASIC20.02■□□□□ 0.79
GPC4O75487 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
GPC4O75487 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GPC4O75487 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
GPC4O75487 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GPC4O75487 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
GPC4O75487 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.01■□□□□ 0.79
GPC4O75487 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
GPC4O75487 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.01■□□□□ 0.79
GPC4O75487 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.01■□□□□ 0.79
GPC4O75487 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GPC4O75487 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GPC4O75487 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GPC4O75487 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.01■□□□□ 0.79
GPC4O75487 AC006970.2-201ENST00000450065 779 ntBASIC20.01■□□□□ 0.79
GPC4O75487 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.01■□□□□ 0.79
GPC4O75487 AF201337.1-201ENST00000520239 748 ntBASIC20.01■□□□□ 0.79
GPC4O75487 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.01■□□□□ 0.79
GPC4O75487 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
GPC4O75487 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
GPC4O75487 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GPC4O75487 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.01■□□□□ 0.79
GPC4O75487 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
GPC4O75487 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
GPC4O75487 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.01■□□□□ 0.79
GPC4O75487 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GPC4O75487 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
GPC4O75487 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GPC4O75487 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GPC4O75487 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GPC4O75487 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GPC4O75487 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GPC4O75487 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
GPC4O75487 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20■□□□□ 0.79
GPC4O75487 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
GPC4O75487 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
GPC4O75487 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20■□□□□ 0.79
GPC4O75487 NCF1B-203ENST00000435988 1254 ntBASIC20■□□□□ 0.79
GPC4O75487 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20■□□□□ 0.79
GPC4O75487 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20■□□□□ 0.79
GPC4O75487 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GPC4O75487 AC090192.1-201ENST00000517740 490 ntBASIC20■□□□□ 0.79
GPC4O75487 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20■□□□□ 0.79
GPC4O75487 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GPC4O75487 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GPC4O75487 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GPC4O75487 AC007952.6-201ENST00000573168 2673 ntBASIC19.99■□□□□ 0.79
GPC4O75487 AC003957.1-201ENST00000625108 2673 ntBASIC19.99■□□□□ 0.79
GPC4O75487 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
GPC4O75487 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
GPC4O75487 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GPC4O75487 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GPC4O75487 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GPC4O75487 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GPC4O75487 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GPC4O75487 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GPC4O75487 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
GPC4O75487 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
GPC4O75487 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GPC4O75487 PGM5P4-201ENST00000421970 445 ntBASIC19.99■□□□□ 0.79
GPC4O75487 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GPC4O75487 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.99■□□□□ 0.79
GPC4O75487 AC105036.2-201ENST00000569468 176 ntBASIC19.99■□□□□ 0.79
GPC4O75487 CYP2T3P-201ENST00000601990 817 ntBASIC19.99■□□□□ 0.79
GPC4O75487 AL121832.2-201ENST00000610979 668 ntBASIC19.99■□□□□ 0.79
GPC4O75487 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.99■□□□□ 0.79
GPC4O75487 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.99■□□□□ 0.79
GPC4O75487 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.99■□□□□ 0.79
GPC4O75487 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
GPC4O75487 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GPC4O75487 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GPC4O75487 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
GPC4O75487 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GPC4O75487 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
GPC4O75487 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
GPC4O75487 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms