Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TSPAN3O60637 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
TSPAN3O60637 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TSPAN3O60637 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TSPAN3O60637 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TSPAN3O60637 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TSPAN3O60637 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.66■□□□□ 0.9
TSPAN3O60637 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.66■□□□□ 0.9
TSPAN3O60637 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.66■□□□□ 0.9
TSPAN3O60637 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.66■□□□□ 0.9
TSPAN3O60637 AL023875.1-201ENST00000640777 796 ntBASIC20.66■□□□□ 0.9
TSPAN3O60637 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.66■□□□□ 0.9
TSPAN3O60637 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TSPAN3O60637 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.66■□□□□ 0.9
TSPAN3O60637 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TSPAN3O60637 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TSPAN3O60637 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TSPAN3O60637 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TSPAN3O60637 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.65■□□□□ 0.9
TSPAN3O60637 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.65■□□□□ 0.9
TSPAN3O60637 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TSPAN3O60637 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TSPAN3O60637 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.65■□□□□ 0.9
TSPAN3O60637 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TSPAN3O60637 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.65■□□□□ 0.9
TSPAN3O60637 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TSPAN3O60637 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
TSPAN3O60637 MTDHP1-201ENST00000605323 784 ntBASIC20.65■□□□□ 0.9
TSPAN3O60637 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.65■□□□□ 0.9
TSPAN3O60637 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TSPAN3O60637 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TSPAN3O60637 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.65■□□□□ 0.9
TSPAN3O60637 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.64■□□□□ 0.9
TSPAN3O60637 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
TSPAN3O60637 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.64■□□□□ 0.9
TSPAN3O60637 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TSPAN3O60637 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
TSPAN3O60637 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.64■□□□□ 0.89
TSPAN3O60637 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
TSPAN3O60637 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TSPAN3O60637 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TSPAN3O60637 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
TSPAN3O60637 HLA-G-202ENST00000376815 851 ntBASIC20.64■□□□□ 0.89
TSPAN3O60637 HLA-G-203ENST00000376818 1127 ntBASIC20.64■□□□□ 0.89
TSPAN3O60637 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.64■□□□□ 0.89
TSPAN3O60637 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TSPAN3O60637 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.64■□□□□ 0.89
TSPAN3O60637 AP006294.2-201ENST00000641667 209 ntBASIC20.64■□□□□ 0.89
TSPAN3O60637 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TSPAN3O60637 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.64■□□□□ 0.89
TSPAN3O60637 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TSPAN3O60637 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TSPAN3O60637 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TSPAN3O60637 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.64■□□□□ 0.89
TSPAN3O60637 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TSPAN3O60637 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TSPAN3O60637 KRT8P17-201ENST00000453110 1448 ntBASIC20.63■□□□□ 0.89
TSPAN3O60637 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
TSPAN3O60637 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
TSPAN3O60637 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.63■□□□□ 0.89
TSPAN3O60637 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TSPAN3O60637 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TSPAN3O60637 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TSPAN3O60637 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
TSPAN3O60637 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.63■□□□□ 0.89
TSPAN3O60637 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.63■□□□□ 0.89
TSPAN3O60637 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
TSPAN3O60637 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TSPAN3O60637 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.63■□□□□ 0.89
TSPAN3O60637 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.63■□□□□ 0.89
TSPAN3O60637 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TSPAN3O60637 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.63■□□□□ 0.89
TSPAN3O60637 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.63■□□□□ 0.89
TSPAN3O60637 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.63■□□□□ 0.89
TSPAN3O60637 AL031963.3-201ENST00000606441 850 ntBASIC20.63■□□□□ 0.89
TSPAN3O60637 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.63■□□□□ 0.89
TSPAN3O60637 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TSPAN3O60637 SMG8-203ENST00000578922 2178 ntBASIC20.63■□□□□ 0.89
TSPAN3O60637 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.63■□□□□ 0.89
TSPAN3O60637 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.63■□□□□ 0.89
TSPAN3O60637 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TSPAN3O60637 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TSPAN3O60637 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
TSPAN3O60637 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TSPAN3O60637 KRT8P20-201ENST00000423953 1409 ntBASIC20.62■□□□□ 0.89
TSPAN3O60637 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TSPAN3O60637 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
TSPAN3O60637 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TSPAN3O60637 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.62■□□□□ 0.89
TSPAN3O60637 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
TSPAN3O60637 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TSPAN3O60637 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
TSPAN3O60637 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.62■□□□□ 0.89
TSPAN3O60637 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
TSPAN3O60637 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.62■□□□□ 0.89
TSPAN3O60637 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.62■□□□□ 0.89
TSPAN3O60637 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TSPAN3O60637 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TSPAN3O60637 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TSPAN3O60637 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms