Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GFRA3O60609 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GFRA3O60609 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.62■□□□□ 0.73
GFRA3O60609 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
GFRA3O60609 AC092329.2-201ENST00000598402 547 ntBASIC19.62■□□□□ 0.73
GFRA3O60609 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.62■□□□□ 0.73
GFRA3O60609 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GFRA3O60609 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.62■□□□□ 0.73
GFRA3O60609 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GFRA3O60609 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GFRA3O60609 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.61■□□□□ 0.73
GFRA3O60609 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.61■□□□□ 0.73
GFRA3O60609 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GFRA3O60609 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GFRA3O60609 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GFRA3O60609 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.61■□□□□ 0.73
GFRA3O60609 AC007663.1-201ENST00000438948 1240 ntBASIC19.61■□□□□ 0.73
GFRA3O60609 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GFRA3O60609 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.61■□□□□ 0.73
GFRA3O60609 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.61■□□□□ 0.73
GFRA3O60609 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GFRA3O60609 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
GFRA3O60609 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GFRA3O60609 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
GFRA3O60609 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.6■□□□□ 0.73
GFRA3O60609 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GFRA3O60609 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GFRA3O60609 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.6■□□□□ 0.73
GFRA3O60609 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
GFRA3O60609 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.6■□□□□ 0.73
GFRA3O60609 AC079776.4-201ENST00000511039 504 ntBASIC19.6■□□□□ 0.73
GFRA3O60609 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.6■□□□□ 0.73
GFRA3O60609 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.6■□□□□ 0.73
GFRA3O60609 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
GFRA3O60609 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
GFRA3O60609 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
GFRA3O60609 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.6■□□□□ 0.73
GFRA3O60609 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.6■□□□□ 0.73
GFRA3O60609 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.6■□□□□ 0.73
GFRA3O60609 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.6■□□□□ 0.73
GFRA3O60609 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.6■□□□□ 0.73
GFRA3O60609 ANOS2P-203ENST00000472227 1816 ntBASIC19.6■□□□□ 0.73
GFRA3O60609 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GFRA3O60609 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
GFRA3O60609 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.59■□□□□ 0.73
GFRA3O60609 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GFRA3O60609 AC139530.1-201ENST00000575312 1977 ntBASIC19.59■□□□□ 0.73
GFRA3O60609 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.59■□□□□ 0.73
GFRA3O60609 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.59■□□□□ 0.73
GFRA3O60609 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
GFRA3O60609 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
GFRA3O60609 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GFRA3O60609 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GFRA3O60609 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
GFRA3O60609 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.59■□□□□ 0.73
GFRA3O60609 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
GFRA3O60609 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.59■□□□□ 0.73
GFRA3O60609 AL031008.1-201ENST00000619963 541 ntBASIC19.59■□□□□ 0.73
GFRA3O60609 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
GFRA3O60609 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GFRA3O60609 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.59■□□□□ 0.73
GFRA3O60609 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GFRA3O60609 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
GFRA3O60609 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.59■□□□□ 0.73
GFRA3O60609 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
GFRA3O60609 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
GFRA3O60609 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.58■□□□□ 0.73
GFRA3O60609 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
GFRA3O60609 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.58■□□□□ 0.73
GFRA3O60609 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GFRA3O60609 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GFRA3O60609 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.58■□□□□ 0.72
GFRA3O60609 AC112907.2-201ENST00000448639 330 ntBASIC19.58■□□□□ 0.72
GFRA3O60609 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.58■□□□□ 0.72
GFRA3O60609 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
GFRA3O60609 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.58■□□□□ 0.72
GFRA3O60609 AP000692.2-201ENST00000608391 879 ntBASIC19.58■□□□□ 0.72
GFRA3O60609 AC083849.1-201ENST00000615227 514 ntBASIC19.58■□□□□ 0.72
GFRA3O60609 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
GFRA3O60609 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GFRA3O60609 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
GFRA3O60609 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
GFRA3O60609 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GFRA3O60609 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GFRA3O60609 AC092068.2-201ENST00000590491 1708 ntBASIC19.57■□□□□ 0.72
GFRA3O60609 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GFRA3O60609 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
GFRA3O60609 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.57■□□□□ 0.72
GFRA3O60609 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GFRA3O60609 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GFRA3O60609 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
GFRA3O60609 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
GFRA3O60609 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.57■□□□□ 0.72
GFRA3O60609 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GFRA3O60609 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.57■□□□□ 0.72
GFRA3O60609 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.57■□□□□ 0.72
GFRA3O60609 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.57■□□□□ 0.72
GFRA3O60609 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
GFRA3O60609 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GFRA3O60609 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms