Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZIC3O60481 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZIC3O60481 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.06■□□□□ 0.48
ZIC3O60481 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZIC3O60481 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.06■□□□□ 0.48
ZIC3O60481 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.06■□□□□ 0.48
ZIC3O60481 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZIC3O60481 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
ZIC3O60481 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.06■□□□□ 0.48
ZIC3O60481 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.06■□□□□ 0.48
ZIC3O60481 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.06■□□□□ 0.48
ZIC3O60481 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZIC3O60481 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.06■□□□□ 0.48
ZIC3O60481 AC124283.5-201ENST00000624661 1809 ntBASIC18.06■□□□□ 0.48
ZIC3O60481 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZIC3O60481 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZIC3O60481 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZIC3O60481 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZIC3O60481 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
ZIC3O60481 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
ZIC3O60481 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZIC3O60481 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
ZIC3O60481 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
ZIC3O60481 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZIC3O60481 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ZIC3O60481 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.05■□□□□ 0.48
ZIC3O60481 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZIC3O60481 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
ZIC3O60481 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.05■□□□□ 0.48
ZIC3O60481 RN7SL471P-201ENST00000580476 299 ntBASIC18.05■□□□□ 0.48
ZIC3O60481 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZIC3O60481 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZIC3O60481 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ZIC3O60481 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
ZIC3O60481 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ZIC3O60481 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZIC3O60481 LINC01006-201ENST00000333319 2292 ntBASIC18.05■□□□□ 0.48
ZIC3O60481 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZIC3O60481 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.05■□□□□ 0.48
ZIC3O60481 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZIC3O60481 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZIC3O60481 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
ZIC3O60481 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZIC3O60481 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZIC3O60481 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZIC3O60481 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
ZIC3O60481 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZIC3O60481 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZIC3O60481 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZIC3O60481 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
ZIC3O60481 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZIC3O60481 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZIC3O60481 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.04■□□□□ 0.48
ZIC3O60481 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
ZIC3O60481 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.04■□□□□ 0.48
ZIC3O60481 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
ZIC3O60481 MTDHP1-201ENST00000605323 784 ntBASIC18.04■□□□□ 0.48
ZIC3O60481 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZIC3O60481 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.04■□□□□ 0.48
ZIC3O60481 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZIC3O60481 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.04■□□□□ 0.48
ZIC3O60481 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
ZIC3O60481 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
ZIC3O60481 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZIC3O60481 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZIC3O60481 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
ZIC3O60481 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.03■□□□□ 0.48
ZIC3O60481 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.03■□□□□ 0.48
ZIC3O60481 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZIC3O60481 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZIC3O60481 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.03■□□□□ 0.48
ZIC3O60481 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.03■□□□□ 0.48
ZIC3O60481 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZIC3O60481 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
ZIC3O60481 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.03■□□□□ 0.48
ZIC3O60481 AC098590.1-201ENST00000468126 897 ntBASIC18.03■□□□□ 0.48
ZIC3O60481 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZIC3O60481 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZIC3O60481 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZIC3O60481 KRT16P6-202ENST00000425692 1426 ntBASIC18.03■□□□□ 0.48
ZIC3O60481 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.03■□□□□ 0.48
ZIC3O60481 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
ZIC3O60481 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.03■□□□□ 0.48
ZIC3O60481 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZIC3O60481 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZIC3O60481 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.03■□□□□ 0.48
ZIC3O60481 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZIC3O60481 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZIC3O60481 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZIC3O60481 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ZIC3O60481 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZIC3O60481 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ZIC3O60481 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.02■□□□□ 0.48
ZIC3O60481 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ZIC3O60481 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZIC3O60481 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.02■□□□□ 0.48
ZIC3O60481 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ZIC3O60481 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.02■□□□□ 0.48
ZIC3O60481 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
ZIC3O60481 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms