Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.93■□□□□ 0.62
URB1O60287 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
URB1O60287 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
URB1O60287 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
URB1O60287 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
URB1O60287 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
URB1O60287 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
URB1O60287 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.93■□□□□ 0.62
URB1O60287 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.93■□□□□ 0.62
URB1O60287 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
URB1O60287 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
URB1O60287 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
URB1O60287 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
URB1O60287 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
URB1O60287 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.92■□□□□ 0.62
URB1O60287 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.92■□□□□ 0.62
URB1O60287 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.92■□□□□ 0.62
URB1O60287 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
URB1O60287 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.92■□□□□ 0.62
URB1O60287 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.92■□□□□ 0.62
URB1O60287 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.92■□□□□ 0.62
URB1O60287 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.92■□□□□ 0.62
URB1O60287 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.92■□□□□ 0.62
URB1O60287 AP000550.4-202ENST00000639755 178 ntBASIC18.92■□□□□ 0.62
URB1O60287 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
URB1O60287 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
URB1O60287 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.92■□□□□ 0.62
URB1O60287 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
URB1O60287 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
URB1O60287 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
URB1O60287 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.91■□□□□ 0.62
URB1O60287 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.91■□□□□ 0.62
URB1O60287 MYC-208ENST00000641036 567 ntBASIC18.91■□□□□ 0.62
URB1O60287 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.91■□□□□ 0.62
URB1O60287 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
URB1O60287 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
URB1O60287 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
URB1O60287 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
URB1O60287 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
URB1O60287 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
URB1O60287 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
URB1O60287 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.91■□□□□ 0.62
URB1O60287 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.91■□□□□ 0.62
URB1O60287 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
URB1O60287 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
URB1O60287 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
URB1O60287 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
URB1O60287 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
URB1O60287 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
URB1O60287 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.91■□□□□ 0.62
URB1O60287 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
URB1O60287 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
URB1O60287 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.91■□□□□ 0.62
URB1O60287 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
URB1O60287 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.9■□□□□ 0.62
URB1O60287 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
URB1O60287 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.9■□□□□ 0.62
URB1O60287 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
URB1O60287 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
URB1O60287 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.9■□□□□ 0.62
URB1O60287 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
URB1O60287 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
URB1O60287 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
URB1O60287 ECEL1P2-202ENST00000465689 757 ntBASIC18.9■□□□□ 0.62
URB1O60287 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.9■□□□□ 0.62
URB1O60287 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
URB1O60287 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
URB1O60287 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
URB1O60287 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
URB1O60287 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
URB1O60287 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.9■□□□□ 0.62
URB1O60287 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
URB1O60287 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
URB1O60287 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
URB1O60287 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
URB1O60287 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.9■□□□□ 0.62
URB1O60287 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.9■□□□□ 0.62
URB1O60287 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
URB1O60287 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
URB1O60287 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.9■□□□□ 0.62
URB1O60287 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
URB1O60287 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
URB1O60287 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
URB1O60287 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
URB1O60287 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
URB1O60287 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.89■□□□□ 0.61
URB1O60287 AL450487.1-201ENST00000426799 995 ntBASIC18.89■□□□□ 0.61
URB1O60287 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
URB1O60287 AL121906.2-201ENST00000621597 723 ntBASIC18.89■□□□□ 0.61
URB1O60287 CR392000.1-201ENST00000624770 1228 ntBASIC18.89■□□□□ 0.61
URB1O60287 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
URB1O60287 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
URB1O60287 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.89■□□□□ 0.61
URB1O60287 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
URB1O60287 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
URB1O60287 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
URB1O60287 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
URB1O60287 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
URB1O60287 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
URB1O60287 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms