Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC28A2O43868 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC28A2O43868 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC28A2O43868 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC28A2O43868 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
SLC28A2O43868 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC28A2O43868 AC008403.3-201ENST00000598924 454 ntBASIC19.27■□□□□ 0.68
SLC28A2O43868 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SLC28A2O43868 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC28A2O43868 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SLC28A2O43868 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SLC28A2O43868 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC28A2O43868 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC28A2O43868 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC28A2O43868 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC28A2O43868 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC28A2O43868 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SLC28A2O43868 FP700111.2-201ENST00000619190 1892 ntBASIC19.26■□□□□ 0.67
SLC28A2O43868 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC28A2O43868 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC28A2O43868 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SLC28A2O43868 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC28A2O43868 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.26■□□□□ 0.67
SLC28A2O43868 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC28A2O43868 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC28A2O43868 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC28A2O43868 KRT17P3-201ENST00000420566 1262 ntBASIC19.26■□□□□ 0.67
SLC28A2O43868 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC28A2O43868 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC28A2O43868 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC28A2O43868 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SLC28A2O43868 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC28A2O43868 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SLC28A2O43868 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SLC28A2O43868 AC011484.1-201ENST00000377652 1995 ntBASIC19.26■□□□□ 0.67
SLC28A2O43868 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC28A2O43868 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC28A2O43868 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC28A2O43868 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC28A2O43868 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC28A2O43868 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC28A2O43868 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SLC28A2O43868 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SLC28A2O43868 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC28A2O43868 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
SLC28A2O43868 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SLC28A2O43868 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.25■□□□□ 0.67
SLC28A2O43868 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC28A2O43868 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC28A2O43868 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC28A2O43868 ARMC10P1-201ENST00000313754 855 ntBASIC19.25■□□□□ 0.67
SLC28A2O43868 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC28A2O43868 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC28A2O43868 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC28A2O43868 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
SLC28A2O43868 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC28A2O43868 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.25■□□□□ 0.67
SLC28A2O43868 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.25■□□□□ 0.67
SLC28A2O43868 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SLC28A2O43868 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
SLC28A2O43868 AC120498.10-201ENST00000621827 505 ntBASIC19.25■□□□□ 0.67
SLC28A2O43868 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC28A2O43868 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SLC28A2O43868 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC28A2O43868 KRT17P2-201ENST00000300992 1314 ntBASIC19.25■□□□□ 0.67
SLC28A2O43868 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC28A2O43868 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.24■□□□□ 0.67
SLC28A2O43868 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC28A2O43868 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC28A2O43868 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC28A2O43868 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.24■□□□□ 0.67
SLC28A2O43868 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC28A2O43868 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC28A2O43868 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC28A2O43868 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC28A2O43868 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC28A2O43868 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC28A2O43868 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
SLC28A2O43868 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC28A2O43868 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.24■□□□□ 0.67
SLC28A2O43868 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC28A2O43868 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.24■□□□□ 0.67
SLC28A2O43868 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC28A2O43868 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SLC28A2O43868 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC28A2O43868 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.24■□□□□ 0.67
SLC28A2O43868 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC28A2O43868 AC027702.1-201ENST00000563810 1770 ntBASIC19.24■□□□□ 0.67
SLC28A2O43868 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC28A2O43868 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
SLC28A2O43868 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC28A2O43868 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC28A2O43868 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC28A2O43868 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC28A2O43868 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC28A2O43868 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
SLC28A2O43868 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SLC28A2O43868 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.23■□□□□ 0.67
SLC28A2O43868 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC28A2O43868 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms