Protein–RNA interactions for Protein: O43303

CCP110, Centriolar coiled-coil protein of 110 kDa, humanhuman

Predictions only

Length 1,012 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110O43303 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCP110O43303 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CCP110O43303 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CCP110O43303 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
CCP110O43303 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CCP110O43303 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.98■■□□□ 1.11
CCP110O43303 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CCP110O43303 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCP110O43303 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CCP110O43303 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.97■■□□□ 1.11
CCP110O43303 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CCP110O43303 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CCP110O43303 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CCP110O43303 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.97■■□□□ 1.11
CCP110O43303 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CCP110O43303 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.97■■□□□ 1.11
CCP110O43303 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CCP110O43303 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CCP110O43303 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCP110O43303 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCP110O43303 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCP110O43303 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCP110O43303 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.96■■□□□ 1.11
CCP110O43303 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCP110O43303 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCP110O43303 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCP110O43303 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
CCP110O43303 AIRN-201ENST00000601203 4374 ntBASIC21.96■■□□□ 1.11
CCP110O43303 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCP110O43303 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCP110O43303 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.96■■□□□ 1.11
CCP110O43303 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCP110O43303 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCP110O43303 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC21.95■■□□□ 1.11
CCP110O43303 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
CCP110O43303 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.95■■□□□ 1.11
CCP110O43303 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.11
CCP110O43303 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCP110O43303 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCP110O43303 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.95■■□□□ 1.1
CCP110O43303 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.95■■□□□ 1.1
CCP110O43303 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCP110O43303 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.95■■□□□ 1.1
CCP110O43303 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.95■■□□□ 1.1
CCP110O43303 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.95■■□□□ 1.1
CCP110O43303 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCP110O43303 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCP110O43303 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCP110O43303 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCP110O43303 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCP110O43303 AC061975.6-201ENST00000579045 1553 ntBASIC21.95■■□□□ 1.1
CCP110O43303 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
CCP110O43303 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCP110O43303 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCP110O43303 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCP110O43303 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CCP110O43303 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCP110O43303 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CCP110O43303 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.94■■□□□ 1.1
CCP110O43303 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCP110O43303 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
CCP110O43303 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCP110O43303 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.94■■□□□ 1.1
CCP110O43303 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.94■■□□□ 1.1
CCP110O43303 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.94■■□□□ 1.1
CCP110O43303 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCP110O43303 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCP110O43303 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCP110O43303 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCP110O43303 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.94■■□□□ 1.1
CCP110O43303 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCP110O43303 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCP110O43303 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.94■■□□□ 1.1
CCP110O43303 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCP110O43303 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCP110O43303 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCP110O43303 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.93■■□□□ 1.1
CCP110O43303 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCP110O43303 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CCP110O43303 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CCP110O43303 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.93■■□□□ 1.1
CCP110O43303 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.93■■□□□ 1.1
CCP110O43303 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCP110O43303 AC019069.1-201ENST00000610008 1333 ntBASIC21.93■■□□□ 1.1
CCP110O43303 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCP110O43303 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.93■■□□□ 1.1
CCP110O43303 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CCP110O43303 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCP110O43303 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCP110O43303 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.92■■□□□ 1.1
CCP110O43303 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.92■■□□□ 1.1
CCP110O43303 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCP110O43303 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCP110O43303 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCP110O43303 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.92■■□□□ 1.1
CCP110O43303 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCP110O43303 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.92■■□□□ 1.1
CCP110O43303 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.92■■□□□ 1.1
CCP110O43303 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.92■■□□□ 1.1
CCP110O43303 DUX4L2-201ENST00000561772 1275 ntBASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms