Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC25.57■■□□□ 1.68
ABCC4O15439 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC25.57■■□□□ 1.68
ABCC4O15439 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC25.57■■□□□ 1.68
ABCC4O15439 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
ABCC4O15439 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
ABCC4O15439 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
ABCC4O15439 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ABCC4O15439 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC25.57■■□□□ 1.68
ABCC4O15439 MIR718-201ENST00000390190 70 ntBASIC25.57■■□□□ 1.68
ABCC4O15439 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
ABCC4O15439 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC25.57■■□□□ 1.68
ABCC4O15439 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC25.57■■□□□ 1.68
ABCC4O15439 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC25.57■■□□□ 1.68
ABCC4O15439 SPIB-206ENST00000596074 847 ntTSL 2 BASIC25.57■■□□□ 1.68
ABCC4O15439 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
ABCC4O15439 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
ABCC4O15439 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
ABCC4O15439 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC25.56■■□□□ 1.68
ABCC4O15439 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
ABCC4O15439 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
ABCC4O15439 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC25.56■■□□□ 1.68
ABCC4O15439 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ABCC4O15439 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ABCC4O15439 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
ABCC4O15439 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
ABCC4O15439 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC25.56■■□□□ 1.68
ABCC4O15439 MIR4497-201ENST00000583208 89 ntBASIC25.56■■□□□ 1.68
ABCC4O15439 AC099778.1-201ENST00000568593 1911 ntBASIC25.56■■□□□ 1.68
ABCC4O15439 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ABCC4O15439 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ABCC4O15439 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
ABCC4O15439 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC25.55■■□□□ 1.68
ABCC4O15439 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
ABCC4O15439 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC25.55■■□□□ 1.68
ABCC4O15439 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
ABCC4O15439 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
ABCC4O15439 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
ABCC4O15439 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
ABCC4O15439 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
ABCC4O15439 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
ABCC4O15439 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC25.55■■□□□ 1.68
ABCC4O15439 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
ABCC4O15439 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC25.55■■□□□ 1.68
ABCC4O15439 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
ABCC4O15439 POM121L13P-201ENST00000422362 380 ntBASIC25.55■■□□□ 1.68
ABCC4O15439 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
ABCC4O15439 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC25.55■■□□□ 1.68
ABCC4O15439 BRWD1-AS2-201ENST00000603064 1028 ntBASIC25.55■■□□□ 1.68
ABCC4O15439 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC25.55■■□□□ 1.68
ABCC4O15439 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
ABCC4O15439 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC25.55■■□□□ 1.68
ABCC4O15439 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC25.55■■□□□ 1.68
ABCC4O15439 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC25.55■■□□□ 1.68
ABCC4O15439 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ABCC4O15439 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC25.54■■□□□ 1.68
ABCC4O15439 USP39-204ENST00000409766 2033 ntTSL 2 BASIC25.54■■□□□ 1.68
ABCC4O15439 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC25.54■■□□□ 1.68
ABCC4O15439 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
ABCC4O15439 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
ABCC4O15439 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC25.54■■□□□ 1.68
ABCC4O15439 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
ABCC4O15439 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ABCC4O15439 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
ABCC4O15439 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
ABCC4O15439 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
ABCC4O15439 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ABCC4O15439 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
ABCC4O15439 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
ABCC4O15439 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC25.53■■□□□ 1.68
ABCC4O15439 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
ABCC4O15439 AC073130.3-201ENST00000624389 2278 ntBASIC25.53■■□□□ 1.68
ABCC4O15439 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC25.53■■□□□ 1.68
ABCC4O15439 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
ABCC4O15439 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC25.53■■□□□ 1.68
ABCC4O15439 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC25.53■■□□□ 1.68
ABCC4O15439 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
ABCC4O15439 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ABCC4O15439 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ABCC4O15439 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
ABCC4O15439 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ABCC4O15439 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ABCC4O15439 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
ABCC4O15439 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC25.52■■□□□ 1.68
ABCC4O15439 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
ABCC4O15439 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
ABCC4O15439 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
ABCC4O15439 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC25.52■■□□□ 1.68
ABCC4O15439 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC25.52■■□□□ 1.68
ABCC4O15439 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC25.52■■□□□ 1.68
ABCC4O15439 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
ABCC4O15439 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ABCC4O15439 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
ABCC4O15439 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ABCC4O15439 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC25.51■■□□□ 1.67
ABCC4O15439 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ABCC4O15439 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC25.51■■□□□ 1.67
ABCC4O15439 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ABCC4O15439 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
ABCC4O15439 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
ABCC4O15439 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms