Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
FOXN1O15353 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.98■■□□□ 1.43
FOXN1O15353 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
FOXN1O15353 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
FOXN1O15353 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
FOXN1O15353 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
FOXN1O15353 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
FOXN1O15353 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
FOXN1O15353 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
FOXN1O15353 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC23.98■■□□□ 1.43
FOXN1O15353 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC23.98■■□□□ 1.43
FOXN1O15353 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC23.98■■□□□ 1.43
FOXN1O15353 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC23.98■■□□□ 1.43
FOXN1O15353 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC23.98■■□□□ 1.43
FOXN1O15353 HTR7P1-201ENST00000538670 1336 ntBASIC23.98■■□□□ 1.43
FOXN1O15353 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
FOXN1O15353 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
FOXN1O15353 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
FOXN1O15353 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
FOXN1O15353 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
FOXN1O15353 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
FOXN1O15353 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.97■■□□□ 1.43
FOXN1O15353 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC23.97■■□□□ 1.43
FOXN1O15353 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
FOXN1O15353 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
FOXN1O15353 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC23.97■■□□□ 1.43
FOXN1O15353 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
FOXN1O15353 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
FOXN1O15353 AL390955.1-201ENST00000428694 934 ntBASIC23.97■■□□□ 1.43
FOXN1O15353 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
FOXN1O15353 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC23.97■■□□□ 1.43
FOXN1O15353 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC23.97■■□□□ 1.43
FOXN1O15353 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC23.97■■□□□ 1.43
FOXN1O15353 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC23.97■■□□□ 1.43
FOXN1O15353 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC23.97■■□□□ 1.43
FOXN1O15353 REXO1L10P-201ENST00000615707 1290 ntBASIC23.97■■□□□ 1.43
FOXN1O15353 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
FOXN1O15353 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
FOXN1O15353 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC23.96■■□□□ 1.43
FOXN1O15353 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
FOXN1O15353 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
FOXN1O15353 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC23.96■■□□□ 1.43
FOXN1O15353 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
FOXN1O15353 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
FOXN1O15353 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC23.96■■□□□ 1.43
FOXN1O15353 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
FOXN1O15353 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
FOXN1O15353 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC23.96■■□□□ 1.43
FOXN1O15353 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
FOXN1O15353 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
FOXN1O15353 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
FOXN1O15353 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
FOXN1O15353 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
FOXN1O15353 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
FOXN1O15353 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.96■■□□□ 1.43
FOXN1O15353 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
FOXN1O15353 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.96■■□□□ 1.43
FOXN1O15353 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
FOXN1O15353 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC23.96■■□□□ 1.43
FOXN1O15353 AC003102.1-202ENST00000563394 1796 ntBASIC23.96■■□□□ 1.43
FOXN1O15353 AL024507.2-201ENST00000606070 2574 ntBASIC23.96■■□□□ 1.43
FOXN1O15353 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
FOXN1O15353 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC23.95■■□□□ 1.42
FOXN1O15353 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
FOXN1O15353 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
FOXN1O15353 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
FOXN1O15353 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
FOXN1O15353 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
FOXN1O15353 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
FOXN1O15353 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC23.95■■□□□ 1.42
FOXN1O15353 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
FOXN1O15353 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC23.95■■□□□ 1.42
FOXN1O15353 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC23.95■■□□□ 1.42
FOXN1O15353 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
FOXN1O15353 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC23.95■■□□□ 1.42
FOXN1O15353 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
FOXN1O15353 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
FOXN1O15353 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC23.94■■□□□ 1.42
FOXN1O15353 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
FOXN1O15353 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
FOXN1O15353 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC23.94■■□□□ 1.42
FOXN1O15353 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
FOXN1O15353 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
FOXN1O15353 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
FOXN1O15353 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
FOXN1O15353 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
FOXN1O15353 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
FOXN1O15353 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
FOXN1O15353 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC23.93■■□□□ 1.42
FOXN1O15353 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
FOXN1O15353 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
FOXN1O15353 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC23.93■■□□□ 1.42
FOXN1O15353 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC23.93■■□□□ 1.42
FOXN1O15353 NUDT16P1-203ENST00000513809 620 ntBASIC23.93■■□□□ 1.42
FOXN1O15353 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC23.93■■□□□ 1.42
FOXN1O15353 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC23.93■■□□□ 1.42
FOXN1O15353 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
FOXN1O15353 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC23.93■■□□□ 1.42
FOXN1O15353 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
FOXN1O15353 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms