Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.86■□□□□ 0.61
CLDN4O14493 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.86■□□□□ 0.61
CLDN4O14493 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN4O14493 PTBP1P-201ENST00000554374 1601 ntBASIC18.86■□□□□ 0.61
CLDN4O14493 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CLDN4O14493 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN4O14493 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN4O14493 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.86■□□□□ 0.61
CLDN4O14493 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.86■□□□□ 0.61
CLDN4O14493 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.86■□□□□ 0.61
CLDN4O14493 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CLDN4O14493 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.86■□□□□ 0.61
CLDN4O14493 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.86■□□□□ 0.61
CLDN4O14493 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN4O14493 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CLDN4O14493 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.86■□□□□ 0.61
CLDN4O14493 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN4O14493 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CLDN4O14493 SMG8-203ENST00000578922 2178 ntBASIC18.86■□□□□ 0.61
CLDN4O14493 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN4O14493 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.86■□□□□ 0.61
CLDN4O14493 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.86■□□□□ 0.61
CLDN4O14493 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CLDN4O14493 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN4O14493 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CLDN4O14493 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN4O14493 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN4O14493 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CLDN4O14493 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN4O14493 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN4O14493 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.85■□□□□ 0.61
CLDN4O14493 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CLDN4O14493 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.85■□□□□ 0.61
CLDN4O14493 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.85■□□□□ 0.61
CLDN4O14493 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN4O14493 UNC93B5-201ENST00000530315 699 ntBASIC18.85■□□□□ 0.61
CLDN4O14493 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CLDN4O14493 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN4O14493 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN4O14493 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CLDN4O14493 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN4O14493 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.85■□□□□ 0.61
CLDN4O14493 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN4O14493 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN4O14493 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN4O14493 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN4O14493 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN4O14493 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CLDN4O14493 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CLDN4O14493 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CLDN4O14493 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.84■□□□□ 0.61
CLDN4O14493 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN4O14493 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN4O14493 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN4O14493 KRT16P6-202ENST00000425692 1426 ntBASIC18.84■□□□□ 0.61
CLDN4O14493 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN4O14493 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN4O14493 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CLDN4O14493 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN4O14493 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN4O14493 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN4O14493 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN4O14493 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN4O14493 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN4O14493 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN4O14493 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN4O14493 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.84■□□□□ 0.61
CLDN4O14493 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN4O14493 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN4O14493 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN4O14493 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
CLDN4O14493 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.84■□□□□ 0.61
CLDN4O14493 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN4O14493 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN4O14493 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN4O14493 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN4O14493 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN4O14493 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.84■□□□□ 0.61
CLDN4O14493 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN4O14493 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN4O14493 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN4O14493 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.83■□□□□ 0.61
CLDN4O14493 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
CLDN4O14493 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN4O14493 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN4O14493 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.83■□□□□ 0.6
CLDN4O14493 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.83■□□□□ 0.6
CLDN4O14493 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN4O14493 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN4O14493 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN4O14493 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN4O14493 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN4O14493 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.83■□□□□ 0.6
CLDN4O14493 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN4O14493 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN4O14493 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN4O14493 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN4O14493 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.83■□□□□ 0.6
CLDN4O14493 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN4O14493 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms