Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19■□□□□ 0.63
PDLIM1O00151 AC087623.3-201ENST00000607047 1098 ntBASIC19■□□□□ 0.63
PDLIM1O00151 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19■□□□□ 0.63
PDLIM1O00151 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDLIM1O00151 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PDLIM1O00151 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PDLIM1O00151 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19■□□□□ 0.63
PDLIM1O00151 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
PDLIM1O00151 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19■□□□□ 0.63
PDLIM1O00151 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PDLIM1O00151 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDLIM1O00151 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PDLIM1O00151 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDLIM1O00151 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PDLIM1O00151 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM1O00151 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM1O00151 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM1O00151 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.99■□□□□ 0.63
PDLIM1O00151 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.99■□□□□ 0.63
PDLIM1O00151 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.99■□□□□ 0.63
PDLIM1O00151 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM1O00151 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM1O00151 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM1O00151 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
PDLIM1O00151 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
PDLIM1O00151 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM1O00151 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PDLIM1O00151 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
PDLIM1O00151 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM1O00151 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM1O00151 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM1O00151 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.99■□□□□ 0.63
PDLIM1O00151 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PDLIM1O00151 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.99■□□□□ 0.63
PDLIM1O00151 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM1O00151 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM1O00151 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM1O00151 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM1O00151 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.99■□□□□ 0.63
PDLIM1O00151 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.99■□□□□ 0.63
PDLIM1O00151 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PDLIM1O00151 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.99■□□□□ 0.63
PDLIM1O00151 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM1O00151 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM1O00151 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDLIM1O00151 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
PDLIM1O00151 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDLIM1O00151 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.98■□□□□ 0.63
PDLIM1O00151 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
PDLIM1O00151 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDLIM1O00151 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.98■□□□□ 0.63
PDLIM1O00151 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.98■□□□□ 0.63
PDLIM1O00151 LINC02228-203ENST00000641970 1355 ntBASIC18.98■□□□□ 0.63
PDLIM1O00151 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDLIM1O00151 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDLIM1O00151 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PDLIM1O00151 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.98■□□□□ 0.63
PDLIM1O00151 TERF1P2-201ENST00000583350 1212 ntBASIC18.98■□□□□ 0.63
PDLIM1O00151 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDLIM1O00151 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDLIM1O00151 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.98■□□□□ 0.63
PDLIM1O00151 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDLIM1O00151 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDLIM1O00151 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.98■□□□□ 0.63
PDLIM1O00151 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDLIM1O00151 AP000997.3-201ENST00000623333 2250 ntBASIC18.98■□□□□ 0.63
PDLIM1O00151 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDLIM1O00151 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDLIM1O00151 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
PDLIM1O00151 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM1O00151 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM1O00151 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.97■□□□□ 0.63
PDLIM1O00151 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM1O00151 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM1O00151 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PDLIM1O00151 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM1O00151 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM1O00151 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
PDLIM1O00151 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PDLIM1O00151 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PDLIM1O00151 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.97■□□□□ 0.63
PDLIM1O00151 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
PDLIM1O00151 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM1O00151 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM1O00151 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM1O00151 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.97■□□□□ 0.63
PDLIM1O00151 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM1O00151 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.97■□□□□ 0.63
PDLIM1O00151 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
PDLIM1O00151 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM1O00151 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.97■□□□□ 0.63
PDLIM1O00151 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
PDLIM1O00151 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM1O00151 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDLIM1O00151 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDLIM1O00151 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDLIM1O00151 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PDLIM1O00151 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.96■□□□□ 0.63
PDLIM1O00151 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDLIM1O00151 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms