Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRRM3A6NNA2 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRRM3A6NNA2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRRM3A6NNA2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SRRM3A6NNA2 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRRM3A6NNA2 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SRRM3A6NNA2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.7■□□□□ 0.9
SRRM3A6NNA2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRRM3A6NNA2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SRRM3A6NNA2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SRRM3A6NNA2 AC079140.4-201ENST00000507448 529 ntBASIC20.7■□□□□ 0.9
SRRM3A6NNA2 RARRES2P4-201ENST00000514074 484 ntBASIC20.7■□□□□ 0.9
SRRM3A6NNA2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRRM3A6NNA2 AC092118.2-201ENST00000613495 667 ntBASIC20.7■□□□□ 0.9
SRRM3A6NNA2 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRRM3A6NNA2 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.7■□□□□ 0.9
SRRM3A6NNA2 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.69■□□□□ 0.9
SRRM3A6NNA2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.69■□□□□ 0.9
SRRM3A6NNA2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRRM3A6NNA2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SRRM3A6NNA2 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.69■□□□□ 0.9
SRRM3A6NNA2 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SRRM3A6NNA2 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.69■□□□□ 0.9
SRRM3A6NNA2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SRRM3A6NNA2 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRRM3A6NNA2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRRM3A6NNA2 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SRRM3A6NNA2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SRRM3A6NNA2 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.69■□□□□ 0.9
SRRM3A6NNA2 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRRM3A6NNA2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRRM3A6NNA2 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRRM3A6NNA2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.68■□□□□ 0.9
SRRM3A6NNA2 AL158211.5-201ENST00000623583 2518 ntBASIC20.68■□□□□ 0.9
SRRM3A6NNA2 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRRM3A6NNA2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.68■□□□□ 0.9
SRRM3A6NNA2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.68■□□□□ 0.9
SRRM3A6NNA2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.68■□□□□ 0.9
SRRM3A6NNA2 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.68■□□□□ 0.9
SRRM3A6NNA2 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRRM3A6NNA2 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.68■□□□□ 0.9
SRRM3A6NNA2 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.68■□□□□ 0.9
SRRM3A6NNA2 AC068587.7-201ENST00000641602 218 ntBASIC20.68■□□□□ 0.9
SRRM3A6NNA2 FP700111.2-201ENST00000619190 1892 ntBASIC20.68■□□□□ 0.9
SRRM3A6NNA2 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SRRM3A6NNA2 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRRM3A6NNA2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRRM3A6NNA2 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.68■□□□□ 0.9
SRRM3A6NNA2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SRRM3A6NNA2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRRM3A6NNA2 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
SRRM3A6NNA2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SRRM3A6NNA2 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SRRM3A6NNA2 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRRM3A6NNA2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRRM3A6NNA2 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.67■□□□□ 0.9
SRRM3A6NNA2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRRM3A6NNA2 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRRM3A6NNA2 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.67■□□□□ 0.9
SRRM3A6NNA2 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.67■□□□□ 0.9
SRRM3A6NNA2 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SRRM3A6NNA2 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRRM3A6NNA2 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.67■□□□□ 0.9
SRRM3A6NNA2 ESRRAP1-201ENST00000400596 1257 ntBASIC20.67■□□□□ 0.9
SRRM3A6NNA2 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SRRM3A6NNA2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.67■□□□□ 0.9
SRRM3A6NNA2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SRRM3A6NNA2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.67■□□□□ 0.9
SRRM3A6NNA2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.67■□□□□ 0.9
SRRM3A6NNA2 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SRRM3A6NNA2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.67■□□□□ 0.9
SRRM3A6NNA2 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRRM3A6NNA2 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRRM3A6NNA2 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRRM3A6NNA2 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.67■□□□□ 0.9
SRRM3A6NNA2 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRRM3A6NNA2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SRRM3A6NNA2 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRRM3A6NNA2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRRM3A6NNA2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SRRM3A6NNA2 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SRRM3A6NNA2 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRRM3A6NNA2 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRRM3A6NNA2 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SRRM3A6NNA2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.66■□□□□ 0.9
SRRM3A6NNA2 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRRM3A6NNA2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.66■□□□□ 0.9
SRRM3A6NNA2 UNC93B4-201ENST00000505679 747 ntBASIC20.66■□□□□ 0.9
SRRM3A6NNA2 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.66■□□□□ 0.9
SRRM3A6NNA2 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.66■□□□□ 0.9
SRRM3A6NNA2 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.66■□□□□ 0.9
SRRM3A6NNA2 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.66■□□□□ 0.9
SRRM3A6NNA2 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SRRM3A6NNA2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SRRM3A6NNA2 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRRM3A6NNA2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SRRM3A6NNA2 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRRM3A6NNA2 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SRRM3A6NNA2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRRM3A6NNA2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms