Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LINC01546A6NGU7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01546A6NGU7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01546A6NGU7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01546A6NGU7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC01546A6NGU7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC01546A6NGU7 AL354751.1-201ENST00000412768 1863 ntBASIC14.16□□□□□ -0.14
LINC01546A6NGU7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01546A6NGU7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LINC01546A6NGU7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01546A6NGU7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01546A6NGU7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC01546A6NGU7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01546A6NGU7 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01546A6NGU7 AR-207ENST00000612010 3896 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC01546A6NGU7 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01546A6NGU7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01546A6NGU7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01546A6NGU7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01546A6NGU7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01546A6NGU7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC14.16□□□□□ -0.14
LINC01546A6NGU7 SRD5A1P1-201ENST00000442297 786 ntBASIC14.16□□□□□ -0.14
LINC01546A6NGU7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC01546A6NGU7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC01546A6NGU7 AC011298.3-201ENST00000615796 283 ntBASIC14.16□□□□□ -0.14
LINC01546A6NGU7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01546A6NGU7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC01546A6NGU7 AC104581.1-202ENST00000635932 2618 ntBASIC14.16□□□□□ -0.14
LINC01546A6NGU7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01546A6NGU7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01546A6NGU7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC01546A6NGU7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
LINC01546A6NGU7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC01546A6NGU7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01546A6NGU7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01546A6NGU7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01546A6NGU7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC14.15□□□□□ -0.14
LINC01546A6NGU7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01546A6NGU7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC01546A6NGU7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC01546A6NGU7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01546A6NGU7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01546A6NGU7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01546A6NGU7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC01546A6NGU7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC01546A6NGU7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01546A6NGU7 AC006333.2-201ENST00000607957 2099 ntBASIC14.15□□□□□ -0.14
LINC01546A6NGU7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC01546A6NGU7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01546A6NGU7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01546A6NGU7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01546A6NGU7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC01546A6NGU7 SERBP1P1-201ENST00000396021 1160 ntBASIC14.15□□□□□ -0.14
LINC01546A6NGU7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC01546A6NGU7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC14.15□□□□□ -0.14
LINC01546A6NGU7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01546A6NGU7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01546A6NGU7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
LINC01546A6NGU7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LINC01546A6NGU7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LINC01546A6NGU7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
LINC01546A6NGU7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
LINC01546A6NGU7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC14.15□□□□□ -0.14
LINC01546A6NGU7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01546A6NGU7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01546A6NGU7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01546A6NGU7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC14.15□□□□□ -0.15
LINC01546A6NGU7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC01546A6NGU7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
LINC01546A6NGU7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
LINC01546A6NGU7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01546A6NGU7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC14.14□□□□□ -0.15
LINC01546A6NGU7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC01546A6NGU7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01546A6NGU7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01546A6NGU7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01546A6NGU7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01546A6NGU7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
LINC01546A6NGU7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
LINC01546A6NGU7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01546A6NGU7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC01546A6NGU7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC01546A6NGU7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
LINC01546A6NGU7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC14.14□□□□□ -0.15
LINC01546A6NGU7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01546A6NGU7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01546A6NGU7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01546A6NGU7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01546A6NGU7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01546A6NGU7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01546A6NGU7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01546A6NGU7 AC093525.10-201ENST00000625130 1569 ntBASIC14.13□□□□□ -0.15
LINC01546A6NGU7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC14.13□□□□□ -0.15
LINC01546A6NGU7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
LINC01546A6NGU7 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
LINC01546A6NGU7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC14.13□□□□□ -0.15
LINC01546A6NGU7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01546A6NGU7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC14.13□□□□□ -0.15
LINC01546A6NGU7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01546A6NGU7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms